RiboswitchDB

Genome: Ralstonia pickettii 12J chromosome II (NC_010678.1); Phylum: Betaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

148643-148723 (-)

c-di-GMP-I

147726-148581 (-)

Rpic_3899

Conserved hypothetical signal peptide protein

single gene

DOOR ID: 2313392

Rpic_3899

2

247334-247411 (+)

fluoride

247488-248769 (+)

Rpic_3981

Chloride channel core

Single gene

DOOR ID: 2313429

Rpic_3981

3

469141-469296 (+)

FMN

469422-470148 (+)

ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)

Single gene

DOOR ID: 2313511

Rpic_4191 (ribB)

4

501057-501126 (+)

SAH

501884-502388 (+)

Rpic_4218

Putative transmembrane protein

Operon

DOOR ID: 434066

Rpic_4218,
Rpic_4219,
Rpic_4220

5

606998-607103 (-)

glycine

605598-606852 (-)

Rpic_4307

D-amino-acid dehydrogenase

Single gene

DOOR ID: 2313562

Rpic_4307

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";}}