Genome: Burkholderia phymatum STM815 chromosome II (NC_010623.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 38911-39092 (+)cobalamin39177-40575 (+)Bphy_3143

Precorrin-3B synthase
Bphy_3143Operon

DOOR ID: 427402
Bphy_3143,
Bphy_3144 (cobH),
Bphy_3145,
Bphy_3146
View Structure
2 61941-62220 (-)cobalamin60645-61755 (-)Bphy_3153

Cobalamin biosynthesis protein CobW
Bphy_3153Operon

DOOR ID: 427404
Bphy_3150,
Bphy_3151,
Bphy_3152 (cobN),
Bphy_3153
View Structure
3 62330-62588 (+)cobalamin62774-63518 (+)Bphy_3154

Uroporphyrin-III C-methyltransferase
Bphy_3154Operon

DOOR ID: 427405
Bphy_3154,
Bphy_3155,
Bphy_3156,
Bphy_3157,
Bphy_3158
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4 361625-361714 (-)cobalamin361335-361560 (-)Bphy_3437

Bphy_3437Operon

DOOR ID: 427447
Bphy_3436,
Bphy_3437
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5 948706-948826 (+)ykkC-yxkD948832-949951 (+)Bphy_3974

ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
Bphy_3974Operon

DOOR ID: 427547
Bphy_3974,
Bphy_3975,
Bphy_3976,
Bphy_3977,
Bphy_3978
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6 953099-953146 (+)mini-ykkC953167-956779 (+)Bphy_3979

Bphy_3979Operon

DOOR ID: 427548
Bphy_3979,
Bphy_3980
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7 1915858-1916028 (-)glycine1913456-1914953 (+)Bphy_4848

AMP-dependent synthetase and ligase
Bphy_4848Operon

DOOR ID: 427707
Bphy_4847,
Bphy_4848
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8 2399273-2399393 (-)ZMP-ZTP2398600-2399233 (-)Bphy_5273

Lysine exporter protein (LYSE/YGGA)
Bphy_5273Single gene

DOOR ID: 2298270
Bphy_5273 View Structure