Genome: Mycobacterium marinum M (NC_010612.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 243686-243777 (-)glycine240639-243525 (-)gcvB_1

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		MMAR_0211Operon

DOOR ID: 425221		MMAR_0207 (sdaA),
MMAR_0208 (glyA),
MMAR_0209 (gcvH_1),
MMAR_0210 (gcvT),
MMAR_0211 (gcvB_1)		 View Structure
2 361669-361839 (+)ykoK362137-362353 (+)MMAR_0314

MMAR_0314Single gene

DOOR ID: 2292963		MMAR_0314 View Structure
3 864449-864579 (+)TPP865585-865783 (+)thiS

Thiamine biosynthesis protein ThiS		MMAR_0719Operon

DOOR ID: 425323		MMAR_0718 (thiO),
MMAR_0719 (thiS),
MMAR_0720 (thiG),
MMAR_0721		 View Structure
4 884185-884296 (-)TPP882543-884184 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		MMAR_0735Operon

DOOR ID: 425327		MMAR_0733,
MMAR_0734 (thiD),
MMAR_0735 (thiC)		 View Structure
5 1435470-1435589 (-)SAM-IV1434079-1435429 (-)metC

O-acetylhomoserine sulfhydrylase MetC		MMAR_1185Operon

DOOR ID: 425420		MMAR_1181,
MMAR_1182,
MMAR_1183,
MMAR_1184 (metX),
MMAR_1185 (metC)		 View Structure
6 2834086-2834255 (+)ykoK2834540-2834774 (+)MMAR_2348

MMAR_2348Single gene

DOOR ID: 2293738		MMAR_2348 View Structure
7 3273427-3273602 (+)ykoK3274082-3275243 (+)MMAR_2683

PPE family protein; PPE31		MMAR_2683Single gene

DOOR ID: 2293896		MMAR_2683 View Structure
8 3302473-3302570 (+)glycine3302762-3305600 (+)gcvB

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		MMAR_2708Single gene

DOOR ID: 2293907		MMAR_2708 (gcvB) View Structure
9 3302571-3302696 (+)glycine3302762-3305600 (+)gcvB

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		MMAR_2708Single gene

DOOR ID: 2293907		MMAR_2708 (gcvB) View Structure
10 3478073-3478138 (+)ykkC-III3478148-3478463 (+)MMAR_2872

MMAR_2872single gene

DOOR ID: 2293981		MMAR_2872 View Structure
11 3553203-3553416 (-)cobalamin3551271-3552981 (-)MMAR_2944

PPE family protein		MMAR_2944Single gene

DOOR ID: 2294022		MMAR_2944 View Structure
12 4256142-4256216 (+)fluoride4256404-4257484 (+)MMAR_3452

MMAR_3452Single gene

DOOR ID: 2294232		MMAR_3452 View Structure
13 4841462-4841529 (-)SAH4838546-4840118 (-)MMAR_3900

Conserved hypothetical phage protein		MMAR_3900Operon

DOOR ID: 425967		MMAR_3899,
MMAR_3900,
MMAR_3901,
MMAR_3902		 View Structure
14 5333031-5333251 (+)cobalamin5333385-5335677 (+)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		MMAR_4328Single gene

DOOR ID: 2294607		MMAR_4328 (metE) View Structure
15 5717643-5717856 (+)ydaO-yuaA5717865-5719023 (+)rpfA

Resuscitation-promoting factor RpfA		MMAR_4665Single gene

DOOR ID: 2294767		MMAR_4665 (rpfA) View Structure
16 5879454-5879535 (+)SAH5879549-5883284 (+)metH

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)		MMAR_4825Single gene

DOOR ID: 2294821		MMAR_4825 (metH) View Structure
17 6176832-6176959 (-)AdoCbl6176618-6176828 (-)MMAR_5098

Conserved hypothetical membrane protein		MMAR_5098Operon

DOOR ID: 426203		MMAR_5096 (gpmB),
MMAR_5097,
MMAR_5098		 View Structure