Genome: Streptomyces griseus subsp. griseus NBRC 13350 (NC_010572.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 290025-290151 (-)cobalamin288813-289923 (-)SGR_272

Putative FecCD-family membrane transport protein
SGR_272Operon

DOOR ID: 420087
SGR_270,
SGR_271,
SGR_272
View Structure
2 559858-560045 (-)ydaO-yuaA559009-559852 (-)SGR_478

SGR_478Single gene

DOOR ID: 2281955
SGR_478 View Structure
3 780795-780887 (-)AdoCbl780533-780749 (-)SGR_663

SGR_663Operon

DOOR ID: 420161
SGR_662,
SGR_663
View Structure
4 1131616-1131776 (-)ydaO-yuaA1130659-1131613 (-)SGR_955

Putative M23-family secreted peptidase
SGR_955Single gene

DOOR ID: 2282180
SGR_955 View Structure
5 1414970-1415063 (+)yybP-ykoY1415202-1415787 (+)SGR_1199

SGR_1199Single gene

DOOR ID: 2282297
SGR_1199 View Structure
6 1431231-1431376 (-)cobalamin1428717-1431042 (-)SGR_1212

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
SGR_1212Single gene

DOOR ID: 2282302
SGR_1212 View Structure
7 1433077-1433256 (+)cobalamin1433483-1434986 (+)SGR_1215

Putative NAD-dependent aldehyde dehydrogenase
SGR_1215Operon

DOOR ID: 420250
SGR_1215,
SGR_1216,
SGR_1217,
SGR_1218,
SGR_1219
View Structure
8 1942190-1942266 (-)cobalamin1940639-1942052 (-)SGR_1647

SGR_1647Single gene

DOOR ID: 2282481
SGR_1647 View Structure
9 1942429-1942499 (+)cobalamin1942631-1945427 (+)SGR_1648

SGR_1648Operon

DOOR ID: 420344
SGR_1648,
SGR_1649,
SGR_1650,
SGR_1651,
SGR_1652,
SGR_1653
View Structure
10 1950681-1950825 (+)cobalamin1950936-1952265 (-)SGR_1654

Putative RNA methyltransferase
SGR_1654Single gene

DOOR ID: 2282482
SGR_1654 View Structure
11 1986228-1986394 (-)ydaO-yuaA1985398-1986214 (-)SGR_1686

Putative M23-family secreted peptidase
SGR_1686Single gene

DOOR ID: 2282493
SGR_1686 View Structure
12 2208394-2208510 (-)TPP2207214-2208390 (-)SGR_1857

Putative ABC transporter substrate-binding protein
SGR_1857Operon

DOOR ID: 420389
SGR_1855,
SGR_1856,
SGR_1857
View Structure
13 2416132-2416229 (+)glycine2416403-2417519 (+)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)
SGR_2045Operon

DOOR ID: 420426
SGR_2045 (gcvT),
SGR_2046,
SGR_2047 (glyA)
View Structure
14 2717330-2717471 (+)cobalamin2717606-2720021 (+)SGR_2299

Ribonucleoside-diphosphate reductase
SGR_2299Operon

DOOR ID: 420478
SGR_2299,
SGR_2300
View Structure
15 3235829-3235995 (+)ydaO-yuaA3237233-3237587 (-)SGR_2735

Putative integral membrane protein
SGR_2735Single gene

DOOR ID: 2283006
SGR_2735 View Structure
16 3750231-3750358 (-)SAM3748909-3750211 (-)SGR_3228

Putative threonine synthase
SGR_3228Operon

DOOR ID: 420640
SGR_3227,
SGR_3228
View Structure
17 4274187-4274320 (-)TPP4270925-4272314 (-)SGR_3652

SGR_3652Operon

DOOR ID: 420722
SGR_3652,
SGR_3653
View Structure
18 4468634-4468719 (+)cobalamin4468813-4472419 (+)cobN

Putative cobalamin biosynthesis protein CobN
SGR_3825Single gene

DOOR ID: 2283529
SGR_3825 (cobN) View Structure
19 4570569-4570721 (+)ydaO-yuaA4570732-4571764 (+)SGR_3897

Putative M23-family secreted peptidase
SGR_3897Single gene

DOOR ID: 2283561
SGR_3897 View Structure
20 5189215-5189397 (+)ydaO-yuaA5189402-5190107 (+)SGR_4438

Putative secreted protein
SGR_4438Single gene

DOOR ID: 2283847
SGR_4438 View Structure
21 5437009-5437127 (+)cobalamin5437185-5438187 (+)SGR_4627

Putative Fe uptake ABC transporter solute-binding protein
SGR_4627Operon

DOOR ID: 420901
SGR_4627,
SGR_4628,
SGR_4629
View Structure
22 6310536-6310653 (+)SAM-IV6310831-6312211 (+)SGR_5362

Putative aminotransferase
SGR_5362Single gene

DOOR ID: 2284346
SGR_5362 View Structure
23 6344771-6344883 (-)TPP6343355-6343595 (-)SGR_5393

SGR_5393Operon

DOOR ID: 421034
SGR_5392 (thiG),
SGR_5393,
SGR_5394
View Structure
24 6624322-6624454 (-)cobalamin6623158-6624184 (-)cobD

Cobalamin biosynthesis protein CobD
SGR_5645Operon

DOOR ID: 421080
SGR_5641,
SGR_5642,
SGR_5643,
SGR_5644,
SGR_5645 (cobD)
View Structure
25 7179511-7179641 (+)FMN7179814-7180915 (+)SGR_6089

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
SGR_6089Operon

DOOR ID: 421169
SGR_6089,
SGR_6090,
SGR_6091,
SGR_6092,
SGR_6093 (ribH),
SGR_6094 (hisE)
View Structure
26 7259074-7259171 (+)glycine7259363-7262249 (+)SGR_6151

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
SGR_6151Single gene

DOOR ID: 2284708
SGR_6151 View Structure
27 7468145-7468330 (-)ydaO-yuaA7467670-7468141 (-)SGR_6289

Putative NLP/P60-family protein
SGR_6289Single gene

DOOR ID: 2284785
SGR_6289 View Structure
28 7932430-7932616 (+)cobalamin7932675-7933725 (+)SGR_6640

Putative ABC transporter solute-binding protein
SGR_6640Operon

DOOR ID: 421275
SGR_6640,
SGR_6641,
SGR_6642
View Structure