RiboswitchDB

Genome: Opitutus terrae PB90-1 (NC_010571.1); Phylum: Verrucomicrobia

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

2413370-2413483 (+)

TPP

2413548-2415951 (+)

Oter_1920

TonB-dependent receptor plug

Single gene

DOOR ID: 2280331

Oter_1920

2

4322251-4322421 (+)

ydaO-yuaA

4322525-4324502 (+)

Oter_3301

Probable potassium transport system protein kup

Single gene

DOOR ID: 2281057

Oter_3301

3

4802980-4803211 (-)

cobalamin

4800992-4802855 (-)

Oter_3696

TonB-dependent receptor

Operon

DOOR ID: 419859

Oter_3694,
Oter_3695,
Oter_3696

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