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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
177475-177576
(+)
TPP
177676-179557 (+)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
RALTA_A0179
Single gene
DOOR ID:
2267331
RALTA_A0179
(thiC)
View Structure
2
185587-185680
(+)
SAH
185798-187217 (+)
ahcY
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
RALTA_A0188
Operon
DOOR ID:
413552
RALTA_A0188
(ahcY)
,
RALTA_A0189,
RALTA_A0190
(metF)
,
RALTA_A0191
View Structure
3
1017100-1017335
(-)
yybP-ykoY
1016495-1017071 (-)
RALTA_A0995
RALTA_A0995
Single gene
DOOR ID:
2267619
RALTA_A0995
View Structure
4
2324894-2325007
(+)
yybP-ykoY
2325126-2325834 (+)
RALTA_A2193
Putative Integral membrane protein; TerC family
RALTA_A2193
Operon
DOOR ID:
413950
RALTA_A2193,
RALTA_A2194
(thyA)
,
RALTA_A2195
(folA)
View Structure
5
2458620-2458744
(+)
ZMP-ZTP
2458868-2460116 (+)
glyA
Serine hydroxymethyltransferase (SHMT) (Serine methylase)
RALTA_A2322
Single gene
DOOR ID:
2268107
RALTA_A2322
(glyA)
View Structure
6
2594911-2595204
(-)
cobalamin
2592944-2594837 (-)
btuB
Outer membrane cobalamin receptor translocator; tonB dependent
RALTA_A2446
Operon
DOOR ID:
414005
RALTA_A2443
(btuR)
,
RALTA_A2444
(btuD)
,
RALTA_A2445
(btuC)
,
RALTA_A2446
(btuB)
View Structure
7
3242902-3243027
(+)
glycine
3243121-3244249 (+)
gcvT
Aminomethyltransferase (0) (Glycine cleavage system T protein)
RALTA_A3074
Operon
DOOR ID:
414141
RALTA_A3074
(gcvT)
,
RALTA_A3075
(gcvH)
View Structure
Genome:
Cupriavidus taiwanensis LMG 19424 chromosome I
(
NC_010528.1
);
Phylum:
Betaproteobacteria
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