Genome: Leptothrix cholodnii SP-6 (NC_010524.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 98086-98259 (+)yybP-ykoY98263-98836 (+)Lcho_0094

Lcho_0094Single gene

DOOR ID: 2265410		Lcho_0094 View Structure
2 123593-123674 (-)SAH122066-123500 (-)Lcho_0119

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		Lcho_0119Operon

DOOR ID: 412139		Lcho_0117,
Lcho_0118,
Lcho_0119		 View Structure
3 347268-347343 (+)sam-alpha347392-348526 (+)metX

Homoserine O-succinyltransferase (HST) (6) (Homoserine transsuccinylase) (HTS)		Lcho_0321Operon

DOOR ID: 412185		Lcho_0321 (metX),
Lcho_0322		 View Structure
4 1658863-1658984 (-)glycine1657679-1658804 (-)Lcho_1561

Glycine cleavage system T protein		Lcho_1561Operon

DOOR ID: 412466		Lcho_1559,
Lcho_1560,
Lcho_1561		 View Structure
5 1658995-1659109 (-)glycine1657679-1658804 (-)Lcho_1561

Glycine cleavage system T protein		Lcho_1561Operon

DOOR ID: 412466		Lcho_1559,
Lcho_1560,
Lcho_1561		 View Structure
6 2403726-2403821 (+)TPP2403877-2405167 (+)Lcho_2203

Permease for cytosine/purines uracil thiamine allantoin		Lcho_2203Single gene

DOOR ID: 2265933		Lcho_2203 View Structure
7 2454513-2454532 (-)SAM-SAH2452637-2453393 (-)Lcho_2247

Putative head morphogenesis protein SPP1 gp7		Lcho_2247Operon

DOOR ID: 412615		Lcho_2243,
Lcho_2244,
Lcho_2245,
Lcho_2246,
Lcho_2247,
Lcho_2248		 View Structure
8 2586300-2586407 (+)glycine2586469-2587756 (+)Lcho_2380

D-amino-acid dehydrogenase 		Lcho_2380Single gene

DOOR ID: 2265972		Lcho_2380 View Structure
9 2638344-2638479 (+)TPP2638558-2640445 (+)Lcho_2430

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Lcho_2430Operon

DOOR ID: 412661		Lcho_2430,
Lcho_2431,
Lcho_2432,
Lcho_2433,
Lcho_2434		 View Structure
10 2927877-2928118 (-)cobalamin2925890-2927807 (-)Lcho_2666

TonB-dependent receptor		Lcho_2666Operon

DOOR ID: 412709		Lcho_2656,
Lcho_2657,
Lcho_2658,
Lcho_2659,
Lcho_2660,
Lcho_2661,
Lcho_2662,
Lcho_2663,
Lcho_2664,
Lcho_2665,
Lcho_2666		 View Structure
11 3064804-3064871 (-)SAH3062477-3062648 (-)Lcho_2780

Cytochrome oxidase maturation protein; cbb3-type		Lcho_2780Operon

DOOR ID: 412730		Lcho_2780,
Lcho_2781		 View Structure
12 3230254-3230380 (+)ZMP-ZTP3230457-3231705 (+)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase) 		Lcho_2927Operon

DOOR ID: 412758		Lcho_2927 (glyA),
Lcho_2928 (nrdR)		 View Structure
13 3629592-3629682 (+)SAH3629747-3632522 (+)Lcho_3270

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)		Lcho_3270Single gene

DOOR ID: 2266212		Lcho_3270 View Structure
14 3723420-3723512 (+)glycine3723543-3724686 (+)Lcho_3346

Extracellular ligand-binding receptor		Lcho_3346Single gene

DOOR ID: 2266231		Lcho_3346 View Structure
15 4180402-4180494 (+)c-di-GMP-I4180689-4182180 (+)Lcho_3737

Outer membrane efflux protein		Lcho_3737operon

DOOR ID: 412928		Lcho_3737,
Lcho_3738		 View Structure