RiboswitchDB

Genome: Burkholderia cenocepacia MC0-3 chromosome II (NC_010515.1); Phylum: Betaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

639529-639633 (-)

fluoride

638207-639449 (-)

Bcenmc03_3731

Chloride channel core

Single gene

DOOR ID: 2260263

Bcenmc03_3731

2

1052410-1052578 (+)

yybP-ykoY

1052647-1053658 (+)

Bcenmc03_4112

Sodium/calcium exchanger membrane region

Single gene

DOOR ID: 2260456

Bcenmc03_4112

3

1301965-1301995 (-)

glutamine

1299890-1300796 (-)

Bcenmc03_4334

Transcriptional regulator; LysR family

Operon

DOOR ID: 410015

Bcenmc03_4334,
Bcenmc03_4335,
Bcenmc03_4336,
Bcenmc03_4337

4

2021460-2021603 (+)

cobalamin

2021635-2021845 (+)

Bcenmc03_4979

Operon

DOOR ID: 410129

Bcenmc03_4979,
Bcenmc03_4980

5

3033042-3033235 (-)

cobalamin

3030897-3032826 (-)

Bcenmc03_5855

TonB-dependent receptor

Single gene

DOOR ID: 2261261

Bcenmc03_5855

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";}}