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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
944045-944239
(+)
cobalamin
944451-946617 (+)
M446_0831
TonB-dependent receptor plug
M446_0831
Operon
DOOR ID:
408137
M446_0831,
M446_0832
View Structure
2
2696265-2696461
(+)
cobalamin
2696490-2696667 (+)
M446_2433
Cobalt transporter; subunit CbtB
M446_2433
Single gene
DOOR ID:
2256484
M446_2433
View Structure
3
3020174-3020254
(+)
SAM-SAH
3021111-3022104 (+)
M446_2715
Fumarylacetoacetate hydrolase family protein
M446_2715
Operon
DOOR ID:
408459
M446_2715,
M446_2716
View Structure
4
3551374-3551481
(-)
TPP
3549432-3551316 (-)
M446_3206
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
M446_3206
Operon
DOOR ID:
408536
M446_3205,
M446_3206
View Structure
5
3932743-3932845
(+)
glycine
3932991-3934134 (+)
M446_3526
Glycine cleavage system T protein
M446_3526
Operon
DOOR ID:
408596
M446_3526,
M446_3527,
M446_3528
View Structure
6
4458865-4458926
(+)
fluoride
4459029-4459251 (+)
M446_4003
Na+/H+ antiporter
M446_4003
Single gene
DOOR ID:
2257194
M446_4003
View Structure
7
7442408-7442534
(-)
TPP
7441103-7442336 (-)
M446_6771
Glycine oxidase ThiO
M446_6771
Operon
DOOR ID:
409146
M446_6770,
M446_6771
View Structure
Genome:
Methylobacterium sp. 4-46
(
NC_010511.1
);
Phylum:
Alphaproteobacteria
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