RiboswitchDB

Genome: Clavibacter michiganensis subsp. sepedonicus (NC_010407.1); Phylum: Actinobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

614683-614766 (-)

ZMP-ZTP

612473-613376 (-)

CMS_0585

Operon

DOOR ID: 397204

CMS_0585,
CMS_0586 (glyA)

2

1157914-1158005 (-)

TPP

1154840-1157099 (-)

thiED

Operon

DOOR ID: 397312

CMS_1102 (thiED),
CMS_1103 (thiM)

3

1614873-1614983 (+)

TPP

1615016-1615667 (+)

CMS_1530

Operon

DOOR ID: 397398

CMS_1530,
CMS_1531,
CMS_1532,
CMS_1533,
CMS_1534

4

2364599-2364685 (-)

glycine

2363260-2364460 (-)

gcvT

Operon

DOOR ID: 397540

CMS_2222 (gcvP),
CMS_2223 (gcvH),
CMS_2224 (gcvT)

5

3031947-3032091 (+)

FMN

3032161-3033229 (+)

ribD

Operon

DOOR ID: 397681

CMS_2876 (ribD),
CMS_2877 (ribE),
CMS_2878 (ribA),
CMS_2879 (ribH)

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";}}