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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
248754-248868
(-)
FMN
247519-248620 (-)
ribD
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
SPH_0281
Operon
DOOR ID:
394116
SPH_0278
(ribH)
,
SPH_0279,
SPH_0280
(ribE)
,
SPH_0281
(ribD)
View Structure
2
469827-469915
(+)
glycine
470009-471332 (+)
SPH_0516
D-alanine glycine permease
SPH_0516
Single gene
DOOR ID:
2227491
SPH_0516
View Structure
3
548244-548478
(+)
FMN
548642-549206 (+)
SPH_0599
Riboflavin transporter
SPH_0599
Operon
DOOR ID:
394171
SPH_0599,
SPH_0600,
SPH_0601,
SPH_0602
View Structure
4
749906-749994
(+)
TPP
750208-750877 (+)
SPH_0802
Aminopyrimidine aminohydrolase
SPH_0802
Single gene
DOOR ID:
2227024
SPH_0802
View Structure
5
752787-752875
(+)
TPP
753136-753697 (+)
SPH_0806
ABC-type cobalt transport system; permease component
SPH_0806
Operon
DOOR ID:
394215
SPH_0806,
SPH_0807,
SPH_0808
View Structure
6
759479-759577
(-)
TPP
758603-759395 (-)
thiD
Phosphomethylpyrimidine kinase
SPH_0813
Single gene
DOOR ID:
2227512
SPH_0813
(thiD)
View Structure
7
1822997-1823092
(+)
purine
1823491-1824073 (+)
xpt
Xanthine phosphoribosyltransferase (XPRTase) (2)
SPH_1962
Operon
DOOR ID:
394443
SPH_1962
(xpt)
,
SPH_1963
View Structure
8
2207968-2208070
(-)
TPP
2207606-2207897 (-)
SPH_2398
SPH_2398
Operon
DOOR ID:
394513
SPH_2395,
SPH_2396,
SPH_2397,
SPH_2398
View Structure
Genome:
Streptococcus pneumoniae Hungary19A-6
(
NC_010380.1
);
Phylum:
Firmicutes
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