Genome: Methylobacterium extorquens PA1 (NC_010172.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 665421-665543 (-)TPP663897-664110 (-)Mext_0604

Thiamine biosynthesis protein ThiS		Mext_0604Operon

DOOR ID: 383575		Mext_0602,
Mext_0603,
Mext_0604,
Mext_0605		 View Structure
2 934417-934518 (-)glycine933090-934269 (-)Mext_0855

Glycine cleavage system T protein		Mext_0855Operon

DOOR ID: 383619		Mext_0854,
Mext_0855		 View Structure
3 1328641-1328850 (-)cobalamin1326333-1328478 (-)Mext_1202

TonB-dependent siderophore receptor		Mext_1202Operon

DOOR ID: 383678		Mext_1201,
Mext_1202		 View Structure
4 1617372-1617572 (-)cobalamin1617148-1617331 (-)Mext_1444

Cobalt transporter; subunit CbtB		Mext_1444Operon

DOOR ID: 383718		Mext_1440,
Mext_1441,
Mext_1442,
Mext_1443,
Mext_1444		 View Structure
5 1797909-1798013 (+)TPP1798087-1799980 (+)Mext_1610

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Mext_1610Single gene

DOOR ID: 2203165		Mext_1610 View Structure
6 2947267-2947467 (-)cobalamin2944902-2947215 (-)Mext_2631

TonB-dependent siderophore receptor		Mext_2631Single gene

DOOR ID: 2203675		Mext_2631 View Structure
7 4125564-4125613 (-)mini-ykkC4124730-4125543 (-)Mext_3724

Mext_3724Operon

DOOR ID: 384136		Mext_3722,
Mext_3723,
Mext_3724		 View Structure
8 4131747-4131856 (-)ykkC-yxkD4130347-4131358 (-)Mext_3730

ABC transport system substrate-binding protein		Mext_3730Operon

DOOR ID: 384137		Mext_3725,
Mext_3726,
Mext_3727,
Mext_3728,
Mext_3729,
Mext_3730		 View Structure