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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
124796-125058
(+)
cobalamin
125126-127022 (+)
btuB
YpAngola_A0123
Single gene
DOOR ID:
2191430
YpAngola_A0123
(btuB)
View Structure
2
304729-304918
(-)
FMN
303833-304487 (-)
ribB
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
YpAngola_A0289
Single gene
DOOR ID:
2190931
YpAngola_A0289
(ribB)
View Structure
3
478093-478218
(-)
TPP
475913-477959 (-)
thiC
YpAngola_A0455
Operon
DOOR ID:
377945
YpAngola_A0450,
YpAngola_A0451
(thiG)
,
YpAngola_A0452
(thiS)
,
YpAngola_A0453
(thiF)
,
YpAngola_A0454
(thiE)
,
YpAngola_A0455
(thiC)
View Structure
4
727992-728038
(-)
mini-ykkC
727136-727493 (+)
frdD
YpAngola_A0717
Operon
DOOR ID:
377992
YpAngola_A0714
(frdA)
,
YpAngola_A0715
(frdB)
,
YpAngola_A0716
(frdC)
,
YpAngola_A0717
(frdD)
View Structure
5
1489629-1489775
(+)
MOCO
1490842-1491322 (+)
moaC
Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)
YpAngola_A1435
Operon
DOOR ID:
378111
YpAngola_A1434
(moaA)
,
YpAngola_A1435
(moaC)
,
YpAngola_A1436
(moaD)
,
YpAngola_A1437
(moaE)
View Structure
6
1709328-1709527
(+)
yybP-ykoY
1709537-1710107 (+)
YpAngola_A1655
Putative manganese efflux pump MntP
YpAngola_A1655
Single gene
DOOR ID:
2190294
YpAngola_A1655
View Structure
7
1924705-1924768
(+)
fluoride
1924868-1925252 (+)
crcB
YpAngola_A1857
Single gene
DOOR ID:
2191769
YpAngola_A1857
(crcB)
View Structure
8
3097686-3097823
(+)
TPP
3097843-3098890 (+)
tbpA
YpAngola_A2943
Operon
DOOR ID:
378347
YpAngola_A2943
(tbpA)
,
YpAngola_A2944
(thiP)
,
YpAngola_A2945
(thiQ)
View Structure
9
3266745-3266849
(+)
TPP
3266972-3267773 (+)
thiD
YpAngola_A3091
Single gene
DOOR ID:
2191110
YpAngola_A3091
(thiD)
View Structure
Genome:
Yersinia pestis Angola
(
NC_010159.1
);
Phylum:
Gammaproteobacteria
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