Genome: Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 (NC_010102.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 120810-120909 (-)TPP119794-120778 (-)tbpA

SPAB_00135Operon

DOOR ID: 374441
SPAB_00133 (thiQ),
SPAB_00134 (thiP),
SPAB_00135 (tbpA)
View Structure
2 803859-803955 (+)TPP803986-804784 (+)SPAB_00876

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
SPAB_00876Operon

DOOR ID: 374586
SPAB_00876,
SPAB_00877,
SPAB_00878
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3 974494-974669 (+)cobalamin974765-976145 (+)SPAB_01070

SPAB_01070Operon

DOOR ID: 374617
SPAB_01070,
SPAB_01071 (cbiB),
SPAB_01072 (cbiC),
SPAB_01073 (cbiD),
SPAB_01074,
SPAB_01075,
SPAB_01076,
SPAB_01077,
SPAB_01078,
SPAB_01079,
SPAB_01080,
SPAB_01081,
SPAB_01082,
SPAB_01083,
SPAB_01084,
SPAB_01085 (cbiO),
SPAB_01086,
SPAB_01087 (cobU),
SPAB_01088 (cobS),
SPAB_01089 (cobT)
View Structure
4 1187647-1187748 (-)yybP-ykoY1186968-1187535 (-)SPAB_01380

Probable manganese efflux pump MntP
SPAB_01380Single gene

DOOR ID: 2183692
SPAB_01380 View Structure
5 2253583-2253727 (-)MOCO2252071-2252584 (-)SPAB_02713

SPAB_02713Operon

DOOR ID: 374912
SPAB_02709,
SPAB_02710 (moaE),
SPAB_02711 (moaD),
SPAB_02712 (moaC),
SPAB_02713,
SPAB_02714 (moaA)
View Structure
6 3318968-3319166 (-)FMN3318208-3318862 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
SPAB_03988Single gene

DOOR ID: 2184797
SPAB_03988 (ribB) View Structure
7 4289241-4289434 (+)cobalamin4289499-4291344 (+)btuB

SPAB_05115Operon

DOOR ID: 375372
SPAB_05115 (btuB),
SPAB_05116
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8 4323329-4323492 (-)TPP4321347-4323243 (-)SPAB_05154

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
SPAB_05154Operon

DOOR ID: 375379
SPAB_05149 (thiH),
SPAB_05150 (thiG),
SPAB_05151,
SPAB_05152,
SPAB_05153,
SPAB_05154
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9 4595203-4595247 (+)mini-ykkC4595268-4595586 (+)sugE

SPAB_05469Operon

DOOR ID: 375436
SPAB_05468,
SPAB_05469
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10 4716193-4716305 (+)Mg sensor4716401-4719110 (+)SPAB_05610

SPAB_05610Single gene

DOOR ID: 2185419
SPAB_05610 View Structure