Genome: Salinispora arenicola CNS-205 (NC_009953.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 78653-78732 (+)ZMP-ZTP78755-79595 (+)Sare_0067

Bifunctional protein FolD 1 [Includes: Methylenetetrahydrofolate dehydrogenase ]
Sare_0067Single gene

DOOR ID: 2162152
Sare_0067 View Structure
2 338476-338608 (+)SAM338619-339906 (+)Sare_0305

Threonine synthase
Sare_0305Single gene

DOOR ID: 2162260
Sare_0305 View Structure
3 357435-357554 (-)SAM-IV356141-357386 (-)Sare_0318

Cysteine desulfurase
Sare_0318Single gene

DOOR ID: 2162271
Sare_0318 View Structure
4 603110-603238 (-)ydaO-yuaA602089-603106 (-)Sare_0531

Sare_0531Single gene

DOOR ID: 2162360
Sare_0531 View Structure
5 1933321-1933455 (+)ydaO-yuaA1933692-1934553 (+)Sare_1677

Sare_1677Single gene

DOOR ID: 2162843
Sare_1677 View Structure
6 2154051-2154223 (+)FMN2154381-2155443 (+)Sare_1867

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Sare_1867Operon

DOOR ID: 366220
Sare_1867,
Sare_1868,
Sare_1869,
Sare_1870,
Sare_1871 (ribH),
Sare_1872 (hisE),
Sare_1873 (hisG)
View Structure
7 2571207-2571296 (-)ZMP-ZTP2569734-2571171 (-)Sare_2234

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
Sare_2234Single gene

DOOR ID: 2163053
Sare_2234 View Structure
8 2875684-2875783 (-)glycine2872788-2875608 (-)Sare_2515

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Sare_2515Single gene

DOOR ID: 2163200
Sare_2515 View Structure
9 3088855-3088984 (-)cobalamin3084907-3088576 (-)cobN

Cobaltochelatase; CobN subunit
Sare_2710Operon

DOOR ID: 366361
Sare_2699,
Sare_2700,
Sare_2701,
Sare_2702,
Sare_2703,
Sare_2704 (cbiD),
Sare_2705,
Sare_2706,
Sare_2707,
Sare_2708,
Sare_2709,
Sare_2710 (cobN)
View Structure
10 3173839-3174011 (-)cobalamin3173129-3173810 (-)Sare_2793

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)
Sare_2793Operon

DOOR ID: 366378
Sare_2790,
Sare_2791,
Sare_2792,
Sare_2793
View Structure
11 4190713-4190844 (+)ydaO-yuaA4190889-4191933 (+)Sare_3632

Sare_3632Single gene

DOOR ID: 2163646
Sare_3632 View Structure
12 4352961-4353066 (+)TPP4353141-4353732 (+)Sare_3821

Sare_3821Single gene

DOOR ID: 2163707
Sare_3821 View Structure
13 4856315-4856423 (-)TPP4854503-4855700 (-)Sare_4279

Glycine oxidase ThiO
Sare_4279Operon

DOOR ID: 366665
Sare_4274,
Sare_4275,
Sare_4276,
Sare_4277,
Sare_4278,
Sare_4279,
Sare_4280
View Structure
14 5088819-5088964 (-)cobalamin5087798-5088737 (-)Sare_4501

Periplasmic binding protein
Sare_4501Operon

DOOR ID: 366702
Sare_4499,
Sare_4500,
Sare_4501
View Structure
15 5530984-5531130 (-)cobalamin5528365-5530831 (-)Sare_4877

Ribonucleoside-diphosphate reductase
Sare_4877Operon

DOOR ID: 366769
Sare_4873,
Sare_4874,
Sare_4875,
Sare_4876,
Sare_4877
View Structure