Genome: Escherichia coli HS (NC_009800.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 77266-77365 (-)TPP76251-77235 (-)tbpA


DOOR ID: 351589
EcHS_A0070 (thiQ),
EcHS_A0071 (thiP),
EcHS_A0072 (tbpA)
View Structure
2 843515-843659 (+)MOCO844657-845170 (+)moaB


DOOR ID: 351743
EcHS_A0835 (moaA),
EcHS_A0836 (moaB),
EcHS_A0837 (moaC),
EcHS_A0838 (moaD),
EcHS_A0839 (moaE)
View Structure
3 1924435-1924536 (+)yybP-ykoY1924666-1925233 (+)EcHS_A1911

Probable manganese efflux pump MntP
EcHS_A1911Single gene

DOOR ID: 2131997
EcHS_A1911 View Structure
4 2227685-2227781 (-)TPP2226861-2227650 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)

DOOR ID: 351987
EcHS_A2239 (thiD),
EcHS_A2240 (thiM)
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5 3229401-3229549 (-)FMN3228643-3229297 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
EcHS_A3219Single gene

DOOR ID: 2132401
EcHS_A3219 (ribB) View Structure
6 4193050-4193240 (+)cobalamin4193304-4195149 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 352377
EcHS_A4200 (btuB),
EcHS_A4201 (murI)
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7 4225762-4225862 (-)TPP4223785-4225681 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 352382
EcHS_A4223 (thiH),
EcHS_A4224 (thiG),
EcHS_A4225 (thiS),
EcHS_A4226 (thiF),
EcHS_A4227 (thiE),
EcHS_A4228 (thiC)
View Structure
8 4265274-4265470 (-)lysine4263832-4265182 (-)lysC

EcHS_A4263Single gene

DOOR ID: 2132739
EcHS_A4263 (lysC) View Structure
9 4402107-4402153 (+)mini-ykkC4402170-4402488 (+)sugE

EcHS_A4392Single gene

DOOR ID: 2132796
EcHS_A4392 (sugE) View Structure
10 4502631-4502746 (+)Mg sensor4502839-4505536 (+)mgtA

EcHS_A4497Single gene

DOOR ID: 2132840
EcHS_A4497 (mgtA) View Structure