Genome: Fervidobacterium nodosum Rt17-B1 (NC_009718.1); Phylum: Thermotogae
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 268646-268818 (-)cobalamin267697-268588 (-)Fnod_0257

Periplasmic binding protein
Fnod_0257Operon

DOOR ID: 342844
Fnod_0256,
Fnod_0257
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2 338574-338685 (+)TPP338763-339741 (+)Fnod_0311

ABC transporter; periplasmic binding protein; thiB subfamily
Fnod_0311Single gene

DOOR ID: 2113809
Fnod_0311 View Structure
3 1475634-1475809 (+)cobalamin1475885-1476932 (+)Fnod_1365

Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (1) (N(1)-alpha-phosphoribosyltransferase)
Fnod_1365Operon

DOOR ID: 343070
Fnod_1365,
Fnod_1366,
Fnod_1367,
Fnod_1368,
Fnod_1369,
Fnod_1370,
Fnod_1371,
Fnod_1372,
Fnod_1373
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4 1485865-1486047 (+)cobalamin1486126-1487194 (+)Fnod_1378

Succinate--CoA ligase (ADP-forming)
Fnod_1378Operon

DOOR ID: 343071
Fnod_1378,
Fnod_1379,
Fnod_1380
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5 1532327-1532468 (+)FMN1532566-1533664 (+)Fnod_1415

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Fnod_1415Operon

DOOR ID: 343078
Fnod_1415,
Fnod_1416,
Fnod_1417,
Fnod_1418 (ribH)
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6 1540195-1540307 (-)TPP1539258-1540092 (-)Fnod_1422

Thiamine thiazole synthase
Fnod_1422Operon

DOOR ID: 343080
Fnod_1421,
Fnod_1422
View Structure