Genome: Yersinia pseudotuberculosis IP 31758 (NC_009708.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 156289-156551 (+)cobalamin156619-158512 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 340804
YpsIP31758_0142 (btuB),
YpsIP31758_0143 (murI)
View Structure
2 668049-668238 (+)FMN668480-669134 (+)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
YpsIP31758_0567Single gene

DOOR ID: 2111284
YpsIP31758_0567 (ribB) View Structure
3 1414415-1414519 (+)TPP1414642-1415443 (+)thiD

Phosphomethylpyrimidine kinase
YpsIP31758_1203Single gene

DOOR ID: 2110769
YpsIP31758_1203 (thiD) View Structure
4 2672111-2672310 (+)yybP-ykoY2672320-2672890 (+)YpsIP31758_2372

Putative manganese efflux pump MntP
YpsIP31758_2372Single gene

DOOR ID: 2110624
YpsIP31758_2372 View Structure
5 3203598-3203744 (-)MOCO3201928-3202408 (-)moaC

Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)

DOOR ID: 341291
YpsIP31758_2833 (moaE),
YpsIP31758_2834 (moaD),
YpsIP31758_2835 (moaC)
View Structure
6 3329098-3329161 (+)fluoride3329261-3329645 (+)crcB

Putative fluoride ion transporter CrcB
YpsIP31758_2957Single gene

DOOR ID: 2110695
YpsIP31758_2957 (crcB) View Structure
7 4139449-4139495 (-)mini-ykkC4139114-4139429 (-)sugE

YpsIP31758_3671Single gene

DOOR ID: 2110005
YpsIP31758_3671 (sugE) View Structure
8 4338760-4338885 (+)TPP4339017-4341063 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 341483
YpsIP31758_3853 (thiC),
YpsIP31758_3854 (thiE),
YpsIP31758_3855 (thiF)
View Structure