Genome: Clostridium botulinum A str. Hall (NC_009698.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 193399-193500 (+)SAM193579-194755 (+)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		CLC_0222Single gene

DOOR ID: 2105506		CLC_0222 (metK) View Structure
2 207727-207843 (+)FMN207938-208532 (+)CLC_0231

CLC_0231Single gene

DOOR ID: 2105653		CLC_0231 View Structure
3 233727-233892 (+)ykoK234095-235361 (+)CLC_0259

CLC_0259Single gene

DOOR ID: 2105608		CLC_0259 View Structure
4 290271-290446 (+)lysine290576-292040 (+)lysP

CLC_0308Single gene

DOOR ID: 2105428		CLC_0308 (lysP) View Structure
5 362952-363053 (+)purine363229-364531 (+)CLC_0374

CLC_0374Operon

DOOR ID: 338344		CLC_0374,
CLC_0375 (xpt-1)		 View Structure
6 487834-488008 (+)lysine488169-489936 (+)CLC_0487

CLC_0487Single gene

DOOR ID: 2105894		CLC_0487 View Structure
7 534132-534235 (-)TPP533026-533827 (-)thiD-1

CLC_0525Single gene

DOOR ID: 2104955		CLC_0525 (thiD-1) View Structure
8 628281-628386 (+)TPP628441-629125 (+)CLC_0612

CLC_0612Single gene

DOOR ID: 2105188		CLC_0612 View Structure
9 864723-864823 (+)THF864918-865698 (+)CLC_0846

CLC_0846Single gene

DOOR ID: 2105528		CLC_0846 View Structure
10 992445-992626 (+)cobalamin992768-994250 (+)cobQ

Cobyric acid synthase		CLC_0968Operon

DOOR ID: 338443		CLC_0968 (cobQ),
CLC_0969 (cobD)		 View Structure
11 1166206-1166308 (+)SAM1166412-1167369 (+)CLC_1136

CLC_1136Operon

DOOR ID: 338478		CLC_1136,
CLC_1137,
CLC_1138		 View Structure
12 1340720-1340789 (+)glycine1340879-1341257 (+)grdX

CLC_1295Single gene

DOOR ID: 2105687		CLC_1295 (grdX) View Structure
13 1414752-1414875 (-)ydaO-yuaA1413967-1414747 (-)CLC_1361

CLC_1361Single gene

DOOR ID: 2105400		CLC_1361 View Structure
14 1728869-1728972 (+)SAM1729094-1729982 (+)metF

CLC_1648Single gene

DOOR ID: 2105659		CLC_1648 (metF) View Structure
15 1904438-1904496 (-)fluoride1903193-1904381 (-)CLC_1793

CLC_1793Single gene

DOOR ID: 2105773		CLC_1793 View Structure
16 1933353-1933458 (-)SAM1931947-1933228 (-)CLC_1820

CLC_1820Operon

DOOR ID: 338591		CLC_1818 (metA),
CLC_1819 (hom-2),
CLC_1820		 View Structure
17 2073095-2073196 (-)purine2071963-2073028 (-)CLC_1953

CLC_1953Operon

DOOR ID: 338621		CLC_1952,
CLC_1953		 View Structure
18 2266942-2267041 (-)purine2265474-2266818 (-)CLC_2132

CLC_2132Single gene

DOOR ID: 2105216		CLC_2132 View Structure
19 2313781-2313887 (-)TPP2312908-2313478 (-)thiW

CLC_2177Operon

DOOR ID: 338665		CLC_2176 (thiM-2),
CLC_2177 (thiW)		 View Structure
20 2852197-2852302 (-)ykkC-yxkD2851680-2852118 (-)CLC_2706

CLC_2706Single gene

DOOR ID: 2105127		CLC_2706 View Structure
21 2917969-2918087 (-)FMN2916647-2917745 (-)ribD

CLC_2765Operon

DOOR ID: 338771		CLC_2764 (ribE),
CLC_2765 (ribD)		 View Structure
22 2924110-2924271 (-)ykoK2921096-2923742 (-)mgtA

CLC_2768Single gene

DOOR ID: 2105792		CLC_2768 (mgtA) View Structure
23 2932935-2933036 (-)purine2932364-2932844 (-)purE

CLC_2776Operon

DOOR ID: 338772		CLC_2772 (purN),
CLC_2773 (purM),
CLC_2774 (purF-1),
CLC_2775 (purC),
CLC_2776 (purE)		 View Structure
24 2960294-2960393 (-)purine2958767-2960270 (-)CLC_2798

CLC_2798Single gene

DOOR ID: 2105076		CLC_2798 View Structure
25 2962567-2962656 (-)glycine2960797-2962150 (-)CLC_2799

CLC_2799Single gene

DOOR ID: 2105442		CLC_2799 View Structure
26 2974956-2975055 (-)TPP2973482-2974859 (-)purF-2

CLC_2808Single gene

DOOR ID: 2105853		CLC_2808 (purF-2) View Structure
27 2979615-2979728 (+)FMN2979981-2980623 (+)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		CLC_2815Single gene

DOOR ID: 2105503		CLC_2815 (ribB) View Structure
28 3289987-3290046 (-)fluoride3289566-3289719 (-)CLC_3117

CLC_3117Operon

DOOR ID: 338838		CLC_3116,
CLC_3117		 View Structure
29 3299744-3299834 (-)ZMP-ZTP3297197-3299426 (-)pfl

CLC_3126Single gene

DOOR ID: 2105154		CLC_3126 (pfl) View Structure
30 3379964-3380061 (-)purine3378422-3379877 (-)guaB

CLC_3238Operon

DOOR ID: 338855		CLC_3237 (guaA),
CLC_3238 (guaB)		 View Structure
31 3437192-3437360 (-)lysine3435826-3437029 (-)lysC

CLC_3282Operon

DOOR ID: 338861		CLC_3281 (lysA),
CLC_3282 (lysC)		 View Structure
32 3517086-3517196 (-)SAM3515623-3516949 (-)CLC_3347

CLC_3347Single gene

DOOR ID: 2105829		CLC_3347 View Structure
33 3525799-3526135 (-)glmS3523929-3525756 (-)glmS

CLC_3355Single gene

DOOR ID: 2105788		CLC_3355 (glmS) View Structure
34 3545649-3545775 (+)ydaO-yuaA3546698-3547562 (-)CLC_3377

CLC_3377Operon

DOOR ID: 338884		CLC_3377 View Structure