About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
374845-374985
(-)
MOCO
373268-373751 (-)
moaC
Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)
CGSHiGG_02110
Operon
DOOR ID:
320208
CGSHiGG_02100,
CGSHiGG_02105
(moaD)
,
CGSHiGG_02110
(moaC)
,
CGSHiGG_02115
(moaA)
View Structure
2
858495-858583
(+)
TPP
858656-859379 (+)
CGSHiGG_04575
CGSHiGG_04575
Single gene
DOOR ID:
2068661
CGSHiGG_04575
View Structure
3
960490-960578
(+)
TPP
960707-961499 (+)
CGSHiGG_05260
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
CGSHiGG_05260
Single gene
DOOR ID:
2068676
CGSHiGG_05260
View Structure
4
1358692-1358869
(+)
FMN
1358957-1359605 (+)
ribB
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
CGSHiGG_07315
Operon
DOOR ID:
320397
CGSHiGG_07315
(ribB)
,
CGSHiGG_07320
View Structure
5
1467320-1467430
(-)
glycine
1465837-1467208 (-)
CGSHiGG_07965
Predicted Na+/alanine symporter
CGSHiGG_07965
Single gene
DOOR ID:
2068842
CGSHiGG_07965
View Structure
6
1611719-1611806
(+)
TPP
1611858-1612857 (+)
CGSHiGG_08705
Putative aldolase
CGSHiGG_08705
Single gene
DOOR ID:
2068886
CGSHiGG_08705
View Structure
7
1786600-1786644
(-)
PreQ1
1785495-1785921 (-)
CGSHiGG_09655
6-carboxy-5;6;7;8-tetrahydropterin synthase
CGSHiGG_09655
Single gene
DOOR ID:
2068936
CGSHiGG_09655
View Structure
8
1880609-1880785
(+)
lysine
1882430-1882580 (+)
purU
Formyltetrahydrofolate deformylase (0)
CGSHiGG_10195
Single gene
DOOR ID:
2068969
CGSHiGG_10195
(purU)
View Structure
Genome:
Haemophilus influenzae PittGG
(
NC_009567.1
);
Phylum:
Gammaproteobacteria
a:9:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_009567.1";i:2;s:30:"Haemophilus influenzae PittGG ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:13:"374845-374985";i:6;s:1:"-";i:7;s:4:"MOCO";i:8;s:0:"";i:9;s:13:"373268-373751";i:10;s:1:"-";i:11;s:4:"moaC";i:12;s:91:"Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)";i:13;s:13:"CGSHiGG_02110";i:14;s:6:"Operon";i:15;s:6:"320208";i:16;s:73:"CGSHiGG_02100;CGSHiGG_02105(moaD);CGSHiGG_02110(moaC);CGSHiGG_02115(moaA)";i:17;s:59:"Mo-molybdopterin cofactor biosynthetic process [GO:0006777]";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_009567.1";i:2;s:30:"Haemophilus influenzae PittGG ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:13:"858495-858583";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"858656-859379";i:10;s:1:"+";i:11;s:13:"CGSHiGG_04575";i:12;s:0:"";i:13;s:13:"CGSHiGG_04575";i:14;s:11:"Single gene";i:15;s:7:"2068661";i:16;s:13:"CGSHiGG_04575";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_009567.1";i:2;s:30:"Haemophilus influenzae PittGG ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:13:"960490-960578";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"960707-961499";i:10;s:1:"+";i:11;s:13:"CGSHiGG_05260";i:12;s:102:"Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)";i:13;s:13:"CGSHiGG_05260";i:14;s:11:"Single gene";i:15;s:7:"2068676";i:16;s:13:"CGSHiGG_05260";i:17;s:98:"thiamine biosynthetic process [GO:0009228]; thiamine diphosphate biosynthetic process [GO:0009229]";i:18;s:15:"View Structure ";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_009567.1";i:2;s:30:"Haemophilus influenzae PittGG ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"1358692-1358869";i:6;s:1:"+";i:7;s:3:"FMN";i:8;s:0:"";i:9;s:15:"1358957-1359605";i:10;s:1:"+";i:11;s:4:"ribB";i:12;s:65:"3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)";i:13;s:13:"CGSHiGG_07315";i:14;s:6:"Operon";i:15;s:6:"320397";i:16;s:33:"CGSHiGG_07315(ribB);CGSHiGG_07320";i:17;s:44:"riboflavin biosynthetic process [GO:0009231]";i:18;s:15:"View Structure ";}i:5;a:19:{i:0;i:5;i:1;s:11:"NC_009567.1";i:2;s:30:"Haemophilus influenzae PittGG ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"1467320-1467430";i:6;s:1:"-";i:7;s:7:"glycine";i:8;s:0:"";i:9;s:15:"1465837-1467208";i:10;s:1:"-";i:11;s:13:"CGSHiGG_07965";i:12;s:31:"Predicted Na+/alanine symporter";i:13;s:13:"CGSHiGG_07965";i:14;s:11:"Single gene";i:15;s:7:"2068842";i:16;s:13:"CGSHiGG_07965";i:17;s:0:"";i:18;s:15:"View Structure ";}i:6;a:19:{i:0;i:6;i:1;s:11:"NC_009567.1";i:2;s:30:"Haemophilus influenzae PittGG ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"1611719-1611806";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"1611858-1612857";i:10;s:1:"+";i:11;s:13:"CGSHiGG_08705";i:12;s:17:"Putative aldolase";i:13;s:13:"CGSHiGG_08705";i:14;s:11:"Single gene";i:15;s:7:"2068886";i:16;s:13:"CGSHiGG_08705";i:17;s:69:"thiamine transport [GO:0015888]; transmembrane transport [GO:0055085]";i:18;s:15:"View Structure ";}i:7;a:19:{i:0;i:7;i:1;s:11:"NC_009567.1";i:2;s:30:"Haemophilus influenzae PittGG ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"1786600-1786644";i:6;s:1:"-";i:7;s:5:"PreQ1";i:8;s:0:"";i:9;s:15:"1785495-1785921";i:10;s:1:"-";i:11;s:13:"CGSHiGG_09655";i:12;s:44:"6-carboxy-5;6;7;8-tetrahydropterin synthase ";i:13;s:13:"CGSHiGG_09655";i:14;s:11:"Single gene";i:15;s:7:"2068936";i:16;s:13:"CGSHiGG_09655";i:17;s:43:"queuosine biosynthetic process [GO:0008616]";i:18;s:15:"View Structure ";}i:8;a:19:{i:0;i:8;i:1;s:11:"NC_009567.1";i:2;s:30:"Haemophilus influenzae PittGG ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"1880609-1880785";i:6;s:1:"+";i:7;s:6:"lysine";i:8;s:0:"";i:9;s:15:"1882430-1882580";i:10;s:1:"+";i:11;s:4:"purU";i:12;s:38:"Formyltetrahydrofolate deformylase (0)";i:13;s:13:"CGSHiGG_10195";i:14;s:11:"Single gene";i:15;s:7:"2068969";i:16;s:19:"CGSHiGG_10195(purU)";i:17;s:0:"";i:18;s:15:"View Structure ";}}