RiboswitchDB

Genome: Brucella ovis ATCC 25840 chromosome II (NC_009504.1); Phylum: Alphaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

296886-297099 (+)

cobalamin

297324-297672 (+)

nrdH

Glutaredoxin-like protein nrdH

Operon

DOOR ID: 313153

BOV_A0290 (nrdH),
BOV_A0291 (nrdI),
BOV_A0292,
BOV_A0293 (nrdF)

2

675393-675556 (+)

FMN

675632-676109 (+)

ribH-2

6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)

Single gene

DOOR ID: 2055297

BOV_A0649 (ribH-2)

3

714549-714633 (-)

glycine

713298-714402 (-)

gcvT

Glycine cleavage system T protein (0)

Operon

DOOR ID: 313218

BOV_A0679 (gcvP),
BOV_A0680 (gcvH),
BOV_A0681 (gcvT)

4

739587-739819 (-)

cobalamin

738352-739387 (-)

BOV_A0705

Iron compound ABC transporter; periplasmic iron compound-binding protein

Operon

DOOR ID: 313223

BOV_A0703,
BOV_A0704,
BOV_A0705

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";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_009504.1";i:2;s:38:"Brucella ovis ATCC 25840 chromosome II";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:13:"739587-739819";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"738352-739387";i:10;s:1:"-";i:11;s:9:"BOV_A0705";i:12;s:72:"Iron compound ABC transporter; periplasmic iron compound-binding protein";i:13;s:9:"BOV_A0705";i:14;s:6:"Operon";i:15;s:6:"313223";i:16;s:29:"BOV_A0703;BOV_A0704;BOV_A0705";i:17;s:0:"";i:18;s:15:"View Structure
";}}