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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
123474-123580
(+)
TPP
123609-125010 (+)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
SynRCC307_0129
Single gene
DOOR ID:
2042973
SynRCC307_0129
(thiC)
View Structure
2
1101842-1101981
(-)
cobalamin
1101240-1101819 (-)
hupE
Hydrogenase accessory membrane protein
SynRCC307_1244
Operon
DOOR ID:
307348
SynRCC307_1243,
SynRCC307_1244
(hupE)
View Structure
3
2165375-2165475
(-)
ykkC-yxkD
2164159-2165350 (-)
speB
Agmatinase (1)
SynRCC307_2478
Operon
DOOR ID:
307636
SynRCC307_2472,
SynRCC307_2473
(tauB)
,
SynRCC307_2474
(tauC)
,
SynRCC307_2475
(tauA)
,
SynRCC307_2476
(hypB)
,
SynRCC307_2477,
SynRCC307_2478
(speB)
View Structure
Genome:
Synechococcus sp. RCC307
(
NC_009482.1
);
Phylum:
Cyanobacteria/Melainabacteria group
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