Genome: Salinispora tropica CNB-440 (NC_009380.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 299118-299252 (+)SAM299262-300549 (+)Strop_0263

L-threonine synthase 		Strop_0263Single gene

DOOR ID: 2014921		Strop_0263 View Structure
2 317841-317960 (-)SAM-IV316551-317796 (-)Strop_0275

Aminotransferase; class V		Strop_0275Single gene

DOOR ID: 2014931		Strop_0275 View Structure
3 1922123-1922257 (+)ydaO-yuaA1922495-1923371 (+)Strop_1682

Strop_1682Single gene

DOOR ID: 2015569		Strop_1682 View Structure
4 2143017-2143190 (+)FMN2143352-2144414 (+)Strop_1874

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Strop_1874Operon

DOOR ID: 292978		Strop_1874,
Strop_1875,
Strop_1876,
Strop_1877,
Strop_1878 (ribH),
Strop_1879 (hisE),
Strop_1880 (hisG),
Strop_1881		 View Structure
5 2236165-2236349 (-)cobalamin2234256-2235090 (-)Strop_1968

ABC transporter related		Strop_1968Operon

DOOR ID: 292997		Strop_1967,
Strop_1968,
Strop_1969		 View Structure
6 2367834-2367924 (-)ZMP-ZTP2366361-2367798 (-)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase) 		Strop_2093Single gene

DOOR ID: 2015721		Strop_2093 (glyA) View Structure
7 2571720-2571803 (-)ZMP-ZTP2570782-2571703 (-)Strop_2276

Bifunctional protein FolD 1 [Includes: Methylenetetrahydrofolate dehydrogenase ]		Strop_2276Single gene

DOOR ID: 2015808		Strop_2276 View Structure
8 2673647-2673746 (-)glycine2670756-2673573 (-)Strop_2377

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		Strop_2377Single gene

DOOR ID: 2015868		Strop_2377 View Structure
9 2846488-2846618 (-)cobalamin2842454-2846123 (-)cobN

Hydrogenobyrinic acid a;c-diamide cobaltochelatase 		Strop_2528Operon

DOOR ID: 293097		Strop_2517,
Strop_2518,
Strop_2519,
Strop_2520,
Strop_2521,
Strop_2522 (cbiD),
Strop_2523,
Strop_2524,
Strop_2525,
Strop_2526,
Strop_2527,
Strop_2528 (cobN)		 View Structure
10 2914376-2914547 (-)cobalamin2913666-2914347 (-)Strop_2595

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)		Strop_2595Operon

DOOR ID: 293111		Strop_2592,
Strop_2593,
Strop_2594,
Strop_2595		 View Structure
11 3890461-3890592 (+)ydaO-yuaA3890598-3891669 (+)Strop_3390

Strop_3390Single gene

DOOR ID: 2016290		Strop_3390 View Structure
12 3948844-3948950 (+)TPP3949020-3949617 (+)Strop_3442

Strop_3442Single gene

DOOR ID: 2016318		Strop_3442 View Structure
13 4452048-4452156 (-)TPP4450275-4451433 (-)Strop_3888

Glycine oxidase ThiO		Strop_3888Operon

DOOR ID: 293352		Strop_3883,
Strop_3884,
Strop_3885,
Strop_3886,
Strop_3887,
Strop_3888,
Strop_3889		 View Structure
14 4641186-4641321 (-)cobalamin4639046-4640135 (-)Strop_4080

Transport system permease protein		Strop_4080Operon

DOOR ID: 293390		Strop_4079,
Strop_4080,
Strop_4081,
Strop_4082		 View Structure
15 4966623-4966842 (-)cobalamin4962999-4964052 (-)Strop_4387

Ribonucleoside-diphosphate reductase subunit beta 		Strop_4387Operon

DOOR ID: 293447		Strop_4387,
Strop_4388		 View Structure
16 4972662-4972810 (+)cobalamin4972907-4973399 (+)Strop_4396

Strop_4396Single gene

DOOR ID: 2016710		Strop_4396 View Structure
17 4973499-4973623 (+)cobalamin4973713-4975195 (+)Strop_4397

LPXTG-motif cell wall anchor domain		Strop_4397Operon

DOOR ID: 293449		Strop_4397,
Strop_4398,
Strop_4399,
Strop_4400,
Strop_4401		 View Structure