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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
626192-626406
(-)
cobalamin
623927-626048 (-)
Pnuc_0635
TonB-dependent receptor; plug
Pnuc_0635
Single gene
DOOR ID:
2014382
Pnuc_0635
View Structure
2
888758-888866
(-)
TPP
886776-888720 (-)
Pnuc_0896
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Pnuc_0896
Operon
DOOR ID:
292349
Pnuc_0892,
Pnuc_0893
(thiG)
,
Pnuc_0894,
Pnuc_0895,
Pnuc_0896
View Structure
3
2075578-2075683
(-)
SAH
2074070-2075516 (-)
Pnuc_2002
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
Pnuc_2002
Operon
DOOR ID:
292601
Pnuc_2001,
Pnuc_2002
View Structure
Genome:
Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
(
NC_009379.1
);
Phylum:
Betaproteobacteria
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