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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
47921-48121
(-)
cobalamin
46745-47750 (-)
Rsph17029_3038
Periplasmic binding protein
Rsph17029_3038
Operon
DOOR ID:
274090
Rsph17029_3036,
Rsph17029_3037,
Rsph17029_3038
View Structure
2
343120-343169
(-)
SAM-SAH
341946-343113 (-)
Rsph17029_3280
S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
Rsph17029_3280
Operon
DOOR ID:
274134
Rsph17029_3280,
Rsph17029_3281
View Structure
3
651773-651962
(+)
cobalamin
652051-652429 (+)
Rsph17029_3562
Rsph17029_3562
Single gene
DOOR ID:
1973627
Rsph17029_3562
View Structure
4
656780-656987
(-)
cobalamin
656040-656718 (-)
Rsph17029_3565
Rsph17029_3565
Single gene
DOOR ID:
1973628
Rsph17029_3565
View Structure
5
1058868-1059081
(-)
cobalamin
1058129-1058807 (-)
Rsph17029_3923
Rsph17029_3923
Single gene
DOOR ID:
1973737
Rsph17029_3923
View Structure
6
1093642-1093821
(+)
cobalamin
1093865-1094558 (+)
Rsph17029_3956
Cob(II)yrinic acid a;c-diamide reductase
Rsph17029_3956
Single gene
DOOR ID:
1973745
Rsph17029_3956
View Structure
Genome:
Rhodobacter sphaeroides ATCC 17029 chromosome II
(
NC_009050.1
);
Phylum:
Alphaproteobacteria
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