Genome: Clostridium thermocellum ATCC 27405 (NC_009012.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 135762-135929 (+)FMN136029-137127 (+)Cthe_0104

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Cthe_0104Operon

DOOR ID: 272510		Cthe_0104,
Cthe_0105,
Cthe_0106,
Cthe_0107 (ribH)		 View Structure
2 234427-234485 (+)fluoride234539-235724 (+)Cthe_0193

Sodium/hydrogen exchanger		Cthe_0193Single gene

DOOR ID: 1970366		Cthe_0193 View Structure
3 733772-733877 (+)TPP733974-734175 (+)Cthe_0597

Thiamine biosynthesis protein ThiS		Cthe_0597Operon

DOOR ID: 272604		Cthe_0597,
Cthe_0598 (thiG)		 View Structure
4 798475-798676 (+)cobalamin798911-801002 (+)Cthe_0646

Anaerobic ribonucleoside-triphosphate reductase		Cthe_0646Operon

DOOR ID: 272615		Cthe_0646,
Cthe_0647		 View Structure
5 832597-832704 (+)preQ1-II833899-835201 (+)Cthe_0678

Pyrimidine-nucleoside phosphorylase 		Cthe_0678Operon

DOOR ID: 272619		Cthe_0677,
Cthe_0678,
Cthe_0679		 View Structure
6 1150716-1150893 (+)lysine1151062-1152061 (+)Cthe_0961

Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (1) (Aspartate-beta-semialdehyde dehydrogenase)		Cthe_0961Single gene

DOOR ID: 1970693		Cthe_0961 View Structure
7 1265969-1266070 (-)glycine1264582-1265821 (-)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase) 		Cthe_1058Single gene

DOOR ID: 1970735		Cthe_1058 (glyA) View Structure
8 1273271-1273368 (+)c-di-GMP-I1273443-1274199 (-)Cthe_1066

DNA repair protein RecO (Recombination protein O)		Cthe_1066operon

DOOR ID: 272688		Cthe_1066,
Cthe_3337		 View Structure
9 1386004-1386182 (-)glmS1384095-1385919 (-)Cthe_1162

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Cthe_1162Single gene

DOOR ID: 1970779		Cthe_1162 View Structure
10 1397223-1397353 (-)ydaO-yuaA1396192-1397068 (-)Cthe_1170

4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) 		Cthe_1170Single gene

DOOR ID: 1970782		Cthe_1170 View Structure
11 1772116-1772199 (+)c-di-GMP-I1772310-1773966 (+)Cthe_1452

Uncharacterized protein		Cthe_1452single gene

DOOR ID: 1970920		Cthe_1452 View Structure
12 2075571-2075756 (-)cobalamin2074395-2075352 (-)Cthe_1754

Periplasmic binding protein		Cthe_1754Operon

DOOR ID: 272819		Cthe_1752,
Cthe_1753,
Cthe_1754		 View Structure
13 2513344-2513451 (+)TPP2513547-2513835 (+)Cthe_2115

Cthe_2115Operon

DOOR ID: 272883		Cthe_2115,
Cthe_2116,
Cthe_2117		 View Structure
14 2644995-2645160 (-)ykoK2643919-2644867 (-)Cthe_2215

Mg2 transporter protein CorA family protein		Cthe_2215Single gene

DOOR ID: 1971198		Cthe_2215 View Structure
15 2679717-2679822 (-)SAM2678391-2679585 (-)Cthe_2251

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Cthe_2251Single gene

DOOR ID: 1971203		Cthe_2251 View Structure
16 3637262-3637352 (-)c-di-GMP-I3636400-3637243 (-)Cthe_3081

Transglutaminase domain-containing protein		Cthe_3081single gene

DOOR ID: 1971509		Cthe_3081 View Structure
17 3637528-3637613 (-)c-di-GMP-I3636400-3637243 (-)Cthe_3081

Transglutaminase domain-containing protein		Cthe_3081single gene

DOOR ID: 1971509		Cthe_3081 View Structure