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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
353820-353912
(+)
glycine
353997-355335 (+)
dagA
D-alanine/glycine/Na permease; putative
SSA_0363
Single gene
DOOR ID:
1969617
SSA_0363
(dagA)
View Structure
2
512589-512726
(-)
cobalamin
511697-512297 (+)
SSA_0513
ATP:cob(I)alamin adenosyltransferase; putative
SSA_0513
Operon
DOOR ID:
272102
SSA_0508,
SSA_0509,
SSA_0510,
SSA_0511
(pduX)
,
SSA_0512,
SSA_0513
View Structure
3
1492897-1493033
(-)
preQ1-II
1490319-1492278 (-)
ligA
DNA ligase (Polydeoxyribonucleotide synthase [NAD(+)])
SSA_1484
Operon
DOOR ID:
272298
SSA_1482
(pulI)
,
SSA_1483,
SSA_1484
(ligA)
View Structure
4
1721312-1721468
(-)
ykoK
1720550-1721162 (-)
SSA_1735
UreX; putative
SSA_1735
Single gene
DOOR ID:
1970060
SSA_1735
View Structure
5
1760315-1760462
(-)
FMN
1759624-1760182 (-)
SSA_1773
Riboflavin transporter
SSA_1773
Operon
DOOR ID:
272361
SSA_1772,
SSA_1773
View Structure
6
2355509-2355610
(-)
TPP
2354639-2355392 (-)
SSA_2353
ABC-type nitrate/sulfonate/bicarbonate transport system; permease component; putative
SSA_2353
Operon
DOOR ID:
272484
SSA_2351,
SSA_2352,
SSA_2353
View Structure
Genome:
Streptococcus sanguinis SK36
(
NC_009009.1
);
Phylum:
Firmicutes
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