Genome: Yersinia enterocolitica subsp. enterocolitica 8081 (NC_008800.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 80911-81015 (-)glycine79833-80898 (-)rfaF

ADP-heptose--LPS heptosyltransferase II

DOOR ID: 266207
YE0070 (rfa-2),
YE0071 (rfaF),
YE0072 (rfaD)
View Structure
2 86911-86971 (+)fluoride86982-88530 (-)YE0077

2;3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (2)

DOOR ID: 266209
View Structure
3 157074-157301 (+)cobalamin157368-159267 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 266215
YE0139 (btuB),
YE0140 (dga)
View Structure
4 345526-345651 (-)TPP343426-345313 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 266244
YE0289 (thiH),
YE0290 (thiG),
YE0290A (thiS),
YE0291 (thiF),
YE0292 (thiE),
YE0293 (thiC)
View Structure
5 739971-740079 (-)TPP738906-739869 (-)tbpA

Thiamine-binding periplasmic protein

DOOR ID: 266301
YE0640 (thiQ),
YE0641 (thiP),
YE0642 (tbpA)
View Structure
6 1219794-1219897 (+)TPP1220809-1221574 (-)YE1089

YE1089Single gene

DOOR ID: 1958093
YE1089 View Structure
7 1966683-1966897 (-)yybP-ykoY1966102-1966672 (-)yebN

Putative manganese efflux pump MntP
YE1772Single gene

DOOR ID: 1958416
YE1772 (yebN) View Structure
8 2961936-2962117 (-)cobalamin2960424-2961828 (-)cbiA

Cobyrinate a;c-diamide synthase (1) (Cobyrinic acid a;c-diamide synthetase)

DOOR ID: 266644
YE2715 (cbiL),
YE2716 (cbiK),
YE2717 (cbiJ),
YE2718 (cbiH),
YE2719 (cbiG),
YE2719a (cbiF),
YE2720 (cbiT),
YE2721 (cbiE),
YE2722 (cbiD),
YE2723 (cbiC),
YE2724 (cobD),
YE2725 (cbiA)
View Structure
9 3151626-3151770 (-)MOCO3150147-3150627 (-)moaC

Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)

DOOR ID: 266670
YE2896 (moaE),
YE2897 (moaD),
YE2898 (moaC),
YE2899 (moaA)
View Structure
10 3324846-3324894 (-)mini-ykkC3324515-3324830 (-)Sbal_2825

Sbal_2825Single gene

DOOR ID: 1976228
Sbal_2825 View Structure
11 4002700-4002884 (-)FMN4001889-4002543 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
YE3669Single gene

DOOR ID: 1959237
YE3669 (ribB) View Structure