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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
142147-142315
(+)
yybP-ykoY
142331-142901 (+)
Maqu_0115
Maqu_0115
Operon
DOOR ID:
256493
Maqu_0115,
Maqu_0116,
Maqu_0117,
Maqu_0118,
Maqu_0119
View Structure
2
316115-316324
(+)
cobalamin
316478-318287 (+)
Maqu_0273
TonB-dependent receptor
Maqu_0273
Operon
DOOR ID:
256526
Maqu_0273,
Maqu_0274,
Maqu_0275,
Maqu_0276
View Structure
3
907808-907921
(+)
TPP
909993-910614 (+)
Maqu_0804
NUDIX hydrolase
Maqu_0804
Operon
DOOR ID:
256631
Maqu_0804,
Maqu_0805
View Structure
4
1363565-1363656
(-)
TPP
1362511-1363516 (-)
Maqu_1200
ABC transporter; periplasmic binding protein; thiB subfamily
Maqu_1200
Operon
DOOR ID:
256712
Maqu_1194,
Maqu_1195,
Maqu_1196,
Maqu_1197,
Maqu_1198,
Maqu_1199,
Maqu_1200
View Structure
5
4279828-4280025
(-)
cobalamin
4276934-4279784 (-)
Maqu_3857
Ribonucleoside-diphosphate reductase
Maqu_3857
Operon
DOOR ID:
257279
Maqu_3855,
Maqu_3856,
Maqu_3857
View Structure
Genome:
Marinobacter aquaeolei VT8
(
NC_008740.1
);
Phylum:
Gammaproteobacteria
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