RiboswitchDB

Genome: Gramella forsetii KT0803 (NC_008571.1); Phylum: Bacteroidetes/Chlorobi group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

381646-381752 (+)

SAM

381802-382849 (+)

GFO_0332

Methionine synthase N-terminal domain-like protein (3)

Operon

DOOR ID: 238252

GFO_0332,
GFO_0333

2

816422-816516 (+)

TPP

816558-817407 (-)

uspA

Universal stress protein family protein

Single gene

DOOR ID: 1907470

GFO_0733 (uspA)

3

1156188-1156406 (+)

cobalamin

1156437-1158273 (+)

GFO_1085

TonB-dependent outer membrane receptor

Operon

DOOR ID: 238398

GFO_1085,
GFO_1086

4

3209026-3209115 (-)

TPP

3206539-3208921 (-)

GFO_3050

TonB-dependent outer membrane receptor

Operon

DOOR ID: 238810

GFO_3050,
GFO_3051

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