Genome: Listeria welshimeri serovar 6b str. SLCC5334 (NC_008555.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 118258-118360 (+)SAM118446-120021 (+)lwe0117

Oligopeptide ABC transporter; oligopeptide-binding protein		lwe0117Single gene

DOOR ID: 1902787		lwe0117 View Structure
2 280700-280819 (-)SAM279767-280589 (-)lwe0259

Lipoprotein		lwe0259Operon

DOOR ID: 235896		lwe0256,
lwe0257,
lwe0258,
lwe0259		 View Structure
3 311564-311669 (+)TPP311756-312431 (+)lwe0286

Aminopyrimidine aminohydrolase 		lwe0286Operon

DOOR ID: 235904		lwe0286,
lwe0287 (thiM),
lwe0288,
lwe0289 (thiE)		 View Structure
4 573271-573372 (-)purine571882-573178 (-)lwe0539

Xanthine/uracil permease family protein		lwe0539Single gene

DOOR ID: 1902959		lwe0539 View Structure
5 602837-602935 (-)SAM601451-602729 (-)cysD

O-acetylhomoserine (Thiol)-lyase (9)		lwe0562Operon

DOOR ID: 235950		lwe0561 (metX),
lwe0562 (cysD)		 View Structure
6 720655-720850 (+)glmS720935-722741 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		lwe0695Single gene

DOOR ID: 1903015		lwe0695 (glmS) View Structure
7 783564-783761 (-)lysine782012-783473 (-)lwe0756

Lysine-specific permease		lwe0756Single gene

DOOR ID: 1903040		lwe0756 View Structure
8 870267-870363 (+)SAM870457-871561 (+)lwe0838

Vitamin-B12 independent methionine synthase family protein		lwe0838Single gene

DOOR ID: 1903076		lwe0838 View Structure
9 895273-895320 (+)PreQ1895326-895815 (+)lwe0860

Conserved membrane protein		lwe0860Single gene

DOOR ID: 1903084		lwe0860 View Structure
10 996554-996657 (+)yybP-ykoY996755-997523 (+)lwe0974

Membrane protein; TerC family		lwe0974Single gene

DOOR ID: 1903119		lwe0974 View Structure
11 1122851-1123040 (+)cobalamin1123191-1124076 (-)lwe1108

Transcriptional regulator PocR; putative		lwe1108Single gene

DOOR ID: 1903165		lwe1108 View Structure
12 1141128-1141272 (+)cobalamin1141690-1142830 (+)pduQ

Iron-containing alcohol dehydrogenase 		lwe1129Single gene

DOOR ID: 1903166		lwe1129 (pduQ) View Structure
13 1157829-1158018 (+)cobalamin1158178-1159537 (+)cbiA

Cobyrinate a;c-diamide synthase (1) (Cobyrinic acid a;c-diamide synthetase)		lwe1148Operon

DOOR ID: 236067		lwe1148 (cbiA),
lwe1149 (cobD),
lwe1150 (cbiC),
lwe1151 (cbiD),
lwe1152 (cbiE),
lwe1153 (cbiT),
lwe1154 (cbiF),
lwe1155 (cbiG),
lwe1156 (cbiH),
lwe1157 (cbiJ),
lwe1158 (hemD),
lwe1159 (cbiK),
lwe1160 (cbiL),
lwe1161 (cbiM),
lwe1162 (cbiN),
lwe1163 (cbiQ),
lwe1164 (cbiO),
lwe1165 (cbiP),
lwe1166		 View Structure
14 1351689-1351780 (+)glycine1351862-1352951 (+)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		lwe1363Operon

DOOR ID: 236109		lwe1363 (gcvT),
lwe1364 (gcvP1),
lwe1365 (gcvP2)		 View Structure
15 1442180-1442290 (-)TPP1441551-1442112 (-)lwe1446

Putative membrane protein		lwe1446Single gene

DOOR ID: 1903257		lwe1446 View Structure
16 1698423-1698531 (-)SAM1697115-1698315 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		lwe1683Single gene

DOOR ID: 1903327		lwe1683 (metK) View Structure
17 1716032-1716138 (-)SAM1713628-1715926 (-)lwe1699

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		lwe1699Operon

DOOR ID: 236189		lwe1696,
lwe1697,
lwe1698,
lwe1699		 View Structure
18 1934404-1934504 (-)purine1933743-1934322 (-)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)		lwe1904Operon

DOOR ID: 236231		lwe1903,
lwe1904 (xpt)		 View Structure
19 2000041-2000161 (-)FMN1999239-1999851 (-)lwe1971

Riboflavin transporter		lwe1971Single gene

DOOR ID: 1903411		lwe1971 View Structure
20 2408254-2408372 (-)SAM2407141-2408164 (-)lwe2366

Methionine import ATP-binding protein MetN 		lwe2366Operon

DOOR ID: 236333		lwe2364,
lwe2365,
lwe2366		 View Structure
21 2669870-2670036 (-)ykoK2667013-2669584 (-)mgtA

Mg2+ transport ATPase; P-type 1 		lwe2637Operon

DOOR ID: 236389		lwe2635,
lwe2636 (ftsW),
lwe2637 (mgtA)		 View Structure