Genome: Syntrophobacter fumaroxidans MPOB (NC_008554.1); Phylum: delta/epsilon subdivisions
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 38745-38855 (+)MOCO39106-39952 (+)Sfum_0027

Extracellular solute-binding protein; family 1
Sfum_0027Single gene

DOOR ID: 1900795
Sfum_0027 View Structure
2 387371-387573 (+)cobalamin387697-388759 (+)Sfum_0323

Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (1) (N(1)-alpha-phosphoribosyltransferase)
Sfum_0323Single gene

DOOR ID: 1900928
Sfum_0323 View Structure
3 611193-611274 (-)c-di-GMP-I609454-610006 (-)Sfum_0504

Transcriptional regulator; MucR family
Sfum_0504single gene

DOOR ID: 1901005
Sfum_0504 View Structure
4 1370302-1370477 (-)cobalamin1368828-1369713 (-)Sfum_1101

Sirohydrochlorin cobaltochelatase
Sfum_1101Single gene

DOOR ID: 1901318
Sfum_1101 View Structure
5 2034257-2034435 (-)ykoK2032773-2033808 (-)Sfum_1657

Mg2+ transporter protein; CorA-like
Sfum_1657Single gene

DOOR ID: 1901569
Sfum_1657 View Structure
6 2207671-2207806 (-)ydaO-yuaA2205628-2207614 (-)Sfum_1808

Probable potassium transport system protein kup 1
Sfum_1808Single gene

DOOR ID: 1901637
Sfum_1808 View Structure
7 2222264-2222358 (+)TPP2222413-2223202 (+)Sfum_1820

UBA/THIF-type NAD/FAD binding protein

DOOR ID: 235422
Sfum_1821 (thiG),
Sfum_1822 (thiH)
View Structure
8 2611879-2612073 (-)cobalamin2610947-2611622 (-)Sfum_2136

Precorrin-8X methylmutase

DOOR ID: 235478
View Structure
9 2956592-2956762 (+)ykoK2957256-2958522 (+)Sfum_2395

Natural resistance-associated macrophage protein
Sfum_2395Single gene

DOOR ID: 1901936
Sfum_2395 View Structure
10 3035634-3035772 (-)cobalamin3033981-3035394 (-)Sfum_2456

Radical SAM domain protein
Sfum_2456Single gene

DOOR ID: 1901965
Sfum_2456 View Structure
11 3150567-3150651 (+)c-di-GMP-I3150912-3151470 (+)Sfum_2552

Uncharacterized protein
Sfum_2552single gene

DOOR ID: 1902015
Sfum_2552 View Structure
12 3389252-3389376 (-)cobalamin3387089-3389195 (-)Sfum_2744

TonB-dependent receptor
Sfum_2744Single gene

DOOR ID: 1902099
Sfum_2744 View Structure
13 3391022-3391207 (-)cobalamin3390471-3390924 (-)Sfum_2746


DOOR ID: 235595
View Structure
14 3423188-3423285 (-)TPP3421807-3423097 (-)Sfum_2776

Thiamine biosynthesis protein ThiC
Sfum_2776Single gene

DOOR ID: 1902118
Sfum_2776 View Structure
15 3591322-3591388 (-)fluoride3589428-3591246 (-)Sfum_2910

Dynamin family protein
Sfum_2910Single gene

DOOR ID: 1902189
Sfum_2910 View Structure
16 4137263-4137350 (+)c-di-GMP-I4137525-4138413 (+)Sfum_3372

Metal dependent phosphohydrolase
Sfum_3372single gene

DOOR ID: 1902398
Sfum_3372 View Structure
17 4310866-4310955 (+)c-di-GMP-I4311529-4312183 (+)Sfum_3524

Uncharacterized protein
Sfum_3524single gene

DOOR ID: 1902475
Sfum_3524 View Structure
18 4434364-4434438 (+)c-di-GMP-I4434593-4435277 (+)Sfum_3623

Uncharacterized protein
Sfum_3623single gene

DOOR ID: 1902536
Sfum_3623 View Structure
19 4546307-4546395 (-)c-di-GMP-I4545076-4546021 (-)Sfum_3726

Uncharacterized protein
Sfum_3726single gene

DOOR ID: 1902580
Sfum_3726 View Structure
20 4864879-4864953 (-)c-di-GMP-I4863548-4864739 (-)Sfum_4006

Uncharacterized protein
Sfum_4006single gene

DOOR ID: 1902692
Sfum_4006 View Structure