RiboswitchDB

Genome: Burkholderia cenocepacia HI2424 chromosome II (NC_008543.1); Phylum: Betaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

235869-236037 (-)

yybP-ykoY

234788-235799 (-)

Bcen2424_3404

Single gene

DOOR ID: 1898528

Bcen2424_3404

2

654224-654328 (+)

fluoride

654407-655649 (+)

Bcen2424_3793

Operon

DOOR ID: 234112

Bcen2424_3793,
Bcen2424_3794

3

1406551-1406744 (+)

cobalamin

1406959-1408888 (+)

Bcen2424_4452

Single gene

DOOR ID: 1899015

Bcen2424_4452

4

2370555-2370698 (-)

cobalamin

2370312-2370522 (-)

Bcen2424_5289

Operon

DOOR ID: 234392

Bcen2424_5288,
Bcen2424_5289

5

2974287-2974317 (+)

glutamine

2975485-2976391 (+)

Bcen2424_5845

Operon

DOOR ID: 234486

Bcen2424_5842,
Bcen2424_5843,
Bcen2424_5844,
Bcen2424_5845

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";}}