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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
163329-163422
(-)
TPP
162654-163272 (-)
OEOE_0174
Predicted membrane protein
OEOE_0174
Operon
DOOR ID:
229202
OEOE_0170,
OEOE_0171,
OEOE_0172,
OEOE_0173,
OEOE_0174
View Structure
2
517346-517443
(-)
purine
516687-517308 (-)
OEOE_0537
Xanthine phosphoribosyltransferase (XPRTase) (2)
OEOE_0537
Operon
DOOR ID:
229261
OEOE_0536,
OEOE_0537
View Structure
3
701984-702153
(-)
lysine
700270-701908 (-)
OEOE_0751
Amino acid ABC transporter membrane protein; PAAT family / amino acid ABC transporter substrate-binding protein; PAAT family
OEOE_0751
Operon
DOOR ID:
229288
OEOE_0750,
OEOE_0751
View Structure
4
719836-720007
(+)
lysine
720062-721346 (+)
OEOE_0771
Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)
OEOE_0771
Operon
DOOR ID:
229292
OEOE_0771,
OEOE_0772,
OEOE_0773,
OEOE_0774,
OEOE_0775,
OEOE_0776,
OEOE_0777,
OEOE_0778,
OEOE_0779
View Structure
5
1061230-1061324
(-)
purine
1060015-1061164 (-)
OEOE_1127
Inosine-5'-monophosphate dehydrogenase (05)
OEOE_1127
Operon
DOOR ID:
229343
OEOE_1123
(guaA)
,
OEOE_1124,
OEOE_1125,
OEOE_1126,
OEOE_1127
View Structure
6
1408697-1408786
(-)
TPP
1407957-1408536 (-)
OEOE_1491
ABC-type cobalt transport system; permease component
OEOE_1491
Operon
DOOR ID:
229414
OEOE_1488,
OEOE_1489,
OEOE_1490,
OEOE_1491
View Structure
7
1598055-1598186
(+)
FMN
1598418-1598979 (+)
OEOE_1680
Riboflavin transporter
OEOE_1680
Single gene
DOOR ID:
1889256
OEOE_1680
View Structure
Genome:
Oenococcus oeni PSU-1
(
NC_008528.1
);
Phylum:
Firmicutes
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