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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
327414-327513
(-)
TPP
326818-327367 (-)
LACR_0359
Predicted membrane protein
LACR_0359
Single gene
DOOR ID:
1887700
LACR_0359
View Structure
2
786495-786601
(+)
preQ1-II
787210-787792 (+)
LACR_0848
Putative NADH-flavin reductase
LACR_0848
Single gene
DOOR ID:
1887897
LACR_0848
View Structure
3
1111074-1111148
(+)
fluoride
1111433-1112645 (+)
LACR_1199
Chloride channel protein EriC
LACR_1199
Single gene
DOOR ID:
1888035
LACR_1199
View Structure
4
1176227-1176324
(+)
purine
1176432-1177026 (+)
LACR_1265
Xanthine phosphoribosyltransferase (XPRTase) (2)
LACR_1265
Operon
DOOR ID:
228931
LACR_1265,
LACR_1266
View Structure
5
1283325-1283485
(-)
ykoK
1280340-1283073 (-)
LACR_1370
Cation transport ATPase
LACR_1370
Single gene
DOOR ID:
1888094
LACR_1370
View Structure
6
1290455-1290555
(-)
TPP
1289620-1290373 (-)
LACR_1377
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
LACR_1377
Operon
DOOR ID:
228956
LACR_1375,
LACR_1376,
LACR_1377
View Structure
7
1307347-1307483
(-)
FMN
1306611-1307232 (-)
LACR_1395
Riboflavin transporter
LACR_1395
Single gene
DOOR ID:
1888101
LACR_1395
View Structure
8
1638490-1638665
(-)
lysine
1637495-1638389 (-)
LACR_1729
4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase)
LACR_1729
Single gene
DOOR ID:
1888244
LACR_1729
View Structure
9
2337129-2337310
(+)
lysine
2337467-2338934 (+)
LACR_2505
Lysine:proton symporter; AAT family
LACR_2505
Single gene
DOOR ID:
1888558
LACR_2505
View Structure
Genome:
Lactococcus lactis subsp. cremoris SK11
(
NC_008527.1
);
Phylum:
Firmicutes
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