Genome: Pediococcus pentosaceus ATCC 25745 (NC_008525.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 162135-162315 (+)lysine162430-163810 (+)PEPE_0137

Aspartokinase 		PEPE_0137Operon

DOOR ID: 227812		PEPE_0137,
PEPE_0138		 View Structure
2 382804-382915 (-)TPP382413-382710 (-)PEPE_0334

PEPE_0334Operon

DOOR ID: 227850		PEPE_0331,
PEPE_0332,
PEPE_0333,
PEPE_0334		 View Structure
3 613664-613769 (+)TPP613849-614647 (+)PEPE_0558

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		PEPE_0558Operon

DOOR ID: 227893		PEPE_0558,
PEPE_0559,
PEPE_0560,
PEPE_0561		 View Structure
4 681467-681547 (+)SMK_box682809-684276 (+)PEPE_0642

Permease of the major facilitator superfamily		PEPE_0642Operon

DOOR ID: 227906		PEPE_0641,
PEPE_0642		 View Structure
5 1413948-1414125 (-)lysine1412382-1413834 (-)PEPE_1438

Lysine:proton symporter; AAT family		PEPE_1438Single gene

DOOR ID: 1886232		PEPE_1438 View Structure
6 1424552-1424647 (+)THF1424715-1425270 (+)PEPE_1451

PEPE_1451Single gene

DOOR ID: 1886238		PEPE_1451 View Structure
7 1562310-1562434 (-)FMN1561609-1562191 (-)PEPE_1593

Riboflavin transporter		PEPE_1593Operon

DOOR ID: 228086		PEPE_1592,
PEPE_1593		 View Structure
8 1800990-1801122 (-)FMN1799812-1800874 (-)PEPE_1820

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		PEPE_1820Operon

DOOR ID: 228131		PEPE_1817,
PEPE_1818,
PEPE_1819,
PEPE_1820		 View Structure
9 1817955-1818052 (+)purine1818150-1819476 (+)PEPE_1835

Xanthine/uracil permease		PEPE_1835Operon

DOOR ID: 228136		PEPE_1835,
PEPE_1836,
PEPE_1837		 View Structure