Genome: Rhodopseudomonas palustris BisA53 (NC_008435.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 30436-30517 (-)ZMP-ZTP28805-30410 (-)purH

Bifunctional purine biosynthesis protein PurH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (0) (ATIC) (IMP synthase) (Inosinicase)]		RPE_0026Single gene

DOOR ID: 1877780		RPE_0026 (purH) View Structure
2 249131-249291 (-)yybP-ykoY246993-248487 (+)RPE_0222

Succinate semialdehyde dehydrogenase (6)		RPE_0222Single gene

DOOR ID: 1877880		RPE_0222 View Structure
3 575326-575538 (-)cobalamin573107-575216 (-)RPE_0526

TonB-dependent receptor; plug		RPE_0526Single gene

DOOR ID: 1878041		RPE_0526 View Structure
4 1370978-1371085 (+)ykkC-yxkD1371161-1372232 (+)RPE_1214

NLPA lipoprotein		RPE_1214Single gene

DOOR ID: 1878352		RPE_1214 View Structure
5 1788752-1788834 (-)glycine1787550-1788702 (-)gcvT

Glycine cleavage system T protein		RPE_1597Single gene

DOOR ID: 1878510		RPE_1597 (gcvT) View Structure
6 1788837-1788927 (-)glycine1787550-1788702 (-)gcvT

Glycine cleavage system T protein		RPE_1597Single gene

DOOR ID: 1878510		RPE_1597 (gcvT) View Structure
7 1894110-1894166 (-)mini-ykkC1893770-1894085 (-)sugE

PA14_21770Single gene

DOOR ID: 1881100		PA14_21770 View Structure
8 2177264-2177415 (-)SAH2174634-2175657 (-)RPE_1957

Uncharacterized protein UPF0065		RPE_1957Single gene

DOOR ID: 1878682		RPE_1957 View Structure
9 2282845-2282986 (-)TPP2281592-2281790 (-)RPE_2072

Thiamine biosynthesis protein ThiS		RPE_2072Operon

DOOR ID: 224349		RPE_2072,
RPE_2073		 View Structure
10 2461608-2461809 (-)cobalamin2460389-2461019 (-)cobH

Precorrin-8X methylmutase 		RPE_2225Operon

DOOR ID: 224375		RPE_2223,
RPE_2224,
RPE_2225 (cobH),
RPE_2226		 View Structure
11 2468031-2468257 (-)cobalamin2467206-2467917 (-)RPE_2232

Cob(II)yrinic acid a;c-diamide reductase 		RPE_2232Operon

DOOR ID: 224378		RPE_2231,
RPE_2232		 View Structure
12 2468338-2468530 (+)cobalamin2468640-2469084 (+)RPE_2233

RPE_2233Operon

DOOR ID: 224379		RPE_2233,
RPE_2234		 View Structure
13 3487645-3487850 (-)cobalamin3486676-3487450 (-)RPE_3123

Adenosylcobinamide-GDP ribazoletransferase (6) (Cobalamin synthase) (Cobalamin-5'-phosphate synthase)		RPE_3123Operon

DOOR ID: 224537		RPE_3122,
RPE_3123		 View Structure
14 3487953-3488157 (+)cobalamin3488262-3488589 (+)RPE_3125

RPE_3125Single gene

DOOR ID: 1879258		RPE_3125 View Structure
15 3491365-3491563 (-)cobalamin3490284-3491304 (-)RPE_3128

Transport system permease protein		RPE_3128Operon

DOOR ID: 224538		RPE_3126,
RPE_3127,
RPE_3128		 View Structure
16 3532758-3532969 (-)cobalamin3530275-3532648 (-)RPE_3169

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		RPE_3169Single gene

DOOR ID: 1879268		RPE_3169 View Structure
17 3539727-3539927 (-)cobalamin3537594-3539616 (-)RPE_3176

Anaerobic ribonucleoside-triphosphate reductase		RPE_3176Single gene

DOOR ID: 1879272		RPE_3176 View Structure
18 3579491-3579539 (-)mini-ykkC3579152-3579476 (-)sugE

PA14_40170Operon

DOOR ID: 225539		PA14_40160,
PA14_40170		 View Structure
19 4803673-4803886 (-)cobalamin4802740-4803535 (-)RPE_4295

RPE_4295Operon

DOOR ID: 224765		RPE_4291,
RPE_4292,
RPE_4293,
RPE_4294,
RPE_4295		 View Structure
20 4804231-4804452 (-)cobalamin4802740-4803535 (-)RPE_4295

RPE_4295Operon

DOOR ID: 224765		RPE_4291,
RPE_4292,
RPE_4293,
RPE_4294,
RPE_4295		 View Structure
21 4866590-4866668 (-)sam-alpha4865303-4866506 (-)metX

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)		RPE_4340Single gene

DOOR ID: 1879767		RPE_4340 (metX) View Structure
22 5459740-5459819 (+)sam-alpha5459886-5461086 (+)RPE_4877

O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase) 		RPE_4877Single gene

DOOR ID: 1880021		RPE_4877 View Structure