Genome: Burkholderia ambifaria AMMD chromosome I (NC_008390.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 158418-158551 (-)glycine157214-158333 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		Bamb_0133Operon

DOOR ID: 222700		Bamb_0131,
Bamb_0132,
Bamb_0133 (gcvT)		 View Structure
2 158583-158687 (-)glycine157214-158333 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		Bamb_0133Operon

DOOR ID: 222700		Bamb_0131,
Bamb_0132,
Bamb_0133 (gcvT)		 View Structure
3 219737-219852 (+)SAH219886-221305 (+)Bamb_0186

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		Bamb_0186Single gene

DOOR ID: 1875034		Bamb_0186 View Structure
4 374925-375048 (+)TPP375282-376419 (+)Bamb_0328

Glycine oxidase (9)		Bamb_0328Operon

DOOR ID: 222735		Bamb_0328,
Bamb_0329,
Bamb_0330 (thiG),
Bamb_0331		 View Structure
5 762627-762727 (+)ZMP-ZTP762816-764112 (+)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase) 		Bamb_0683Operon

DOOR ID: 222813		Bamb_0683 (glyA),
Bamb_0684 (nrdR)		 View Structure
6 967855-967996 (-)yybP-ykoY966429-967131 (+)Bamb_0879

Bamb_0879Single gene

DOOR ID: 1875265		Bamb_0879 View Structure
7 1215478-1215595 (-)TPP1213422-1215354 (-)Bamb_1105

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Bamb_1105Single gene

DOOR ID: 1875356		Bamb_1105 View Structure
8 1721069-1721305 (-)cobalamin1720149-1721034 (-)Bamb_1554

Uroporphyrinogen-III C-methyltransferase (07)		Bamb_1554Operon

DOOR ID: 222988		Bamb_1551,
Bamb_1552,
Bamb_1553,
Bamb_1554		 View Structure
9 1721444-1721707 (+)cobalamin1722039-1723128 (+)Bamb_1556

Cobalamin biosynthesis protein CobW		Bamb_1556Operon

DOOR ID: 222989		Bamb_1556,
Bamb_1557 (cobN),
Bamb_1558,
Bamb_1559		 View Structure
10 1742651-1742843 (-)cobalamin1741153-1742545 (-)Bamb_1574

Precorrin-3B synthase		Bamb_1574Operon

DOOR ID: 222992		Bamb_1570,
Bamb_1571,
Bamb_1572,
Bamb_1573 (cobH),
Bamb_1574		 View Structure
11 2762994-2763247 (-)cobalamin2761145-2762144 (-)Bamb_2503

Transport system permease protein		Bamb_2503Operon

DOOR ID: 223186		Bamb_2499,
Bamb_2500 (cobS),
Bamb_2501 (cobT),
Bamb_2502,
Bamb_2503		 View Structure
12 3020116-3020264 (-)FMN3019286-3019997 (-)Bamb_2742

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		Bamb_2742Single gene

DOOR ID: 1875995		Bamb_2742 View Structure
13 3411592-3411635 (+)mini-ykkC3411723-3412038 (+)RPE_3046

RPE_3046Single gene

DOOR ID: 1879239		RPE_3046 View Structure