Genome: Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 (NC_008346.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 731323-731433 (+)TPP731612-732485 (+)Swol_0639

Phosphomethylpyrimidine kinase		Swol_0639Operon

DOOR ID: 219239		Swol_0639,
Swol_0640,
Swol_0641,
Swol_0642,
Swol_0643,
Swol_0644		 View Structure
2 1171439-1171689 (-)MOCO1170237-1171314 (-)Swol_1029

NADH dehydrogenase I chain G		Swol_1029Operon

DOOR ID: 219321		Swol_1024,
Swol_1025,
Swol_1026,
Swol_1027,
Swol_1028,
Swol_1029		 View Structure
3 1171754-1171874 (-)MOCO1170237-1171314 (-)Swol_1029

NADH dehydrogenase I chain G		Swol_1029Operon

DOOR ID: 219321		Swol_1024,
Swol_1025,
Swol_1026,
Swol_1027,
Swol_1028,
Swol_1029		 View Structure
4 1171931-1172054 (-)MOCO1170237-1171314 (-)Swol_1029

NADH dehydrogenase I chain G		Swol_1029Operon

DOOR ID: 219321		Swol_1024,
Swol_1025,
Swol_1026,
Swol_1027,
Swol_1028,
Swol_1029		 View Structure
5 1186597-1186781 (+)cobalamin1186916-1189181 (+)Swol_1043

Swol_1043Single gene

DOOR ID: 1867949		Swol_1043 View Structure
6 1210598-1210716 (+)MOCO1210966-1213429 (-)hppA

K(+)-insensitive pyrophosphate-energized proton pump (Membrane-bound proton-translocating pyrophosphatase) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase)		Swol_1064Single gene

DOOR ID: 1867963		Swol_1064 (hppA) View Structure
7 1297702-1297836 (-)ydaO-yuaA1296366-1297635 (-)Swol_1121

L-lysine 2;3-aminomutase 		Swol_1121Operon

DOOR ID: 219337		Swol_1120,
Swol_1121		 View Structure
8 1376179-1376295 (-)MOCO1375250-1376075 (-)Swol_1189

Swol_1189Single gene

DOOR ID: 1868032		Swol_1189 View Structure
9 1413759-1413876 (-)FMN1412428-1413532 (-)Swol_1222

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Swol_1222Operon

DOOR ID: 219357		Swol_1220,
Swol_1221,
Swol_1222		 View Structure
10 1653067-1653165 (-)SAM1650481-1653001 (-)Swol_1442

Methionine synthase (B12-dependent) (3)		Swol_1442Operon

DOOR ID: 219402		Swol_1437,
Swol_1438,
Swol_1439,
Swol_1440,
Swol_1441,
Swol_1442		 View Structure
11 1858581-1858702 (-)MOCO1857627-1858305 (-)Swol_1632

Sulfate/tungstate uptake family ABC transporter; permease protein		Swol_1632Operon

DOOR ID: 219440		Swol_1630,
Swol_1631,
Swol_1632		 View Structure
12 1907301-1907441 (-)MOCO1905968-1907060 (-)Swol_1679

Periplasmic binding protein		Swol_1679Single gene

DOOR ID: 1868213		Swol_1679 View Structure
13 1984356-1984509 (-)ydaO-yuaA1983119-1984142 (-)Swol_1738

ABC transporter substrate-binding protein		Swol_1738Operon

DOOR ID: 219462		Swol_1736,
Swol_1737,
Swol_1738		 View Structure
14 2034312-2034410 (-)ykkC-yxkD2033638-2034154 (-)Swol_1780

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		Swol_1780Operon

DOOR ID: 219470		Swol_1779,
Swol_1780		 View Structure
15 2086317-2086437 (-)MOCO2085556-2086147 (-)Swol_1826

Formate dehydrogenase alpha subunit		Swol_1826Operon

DOOR ID: 219479		Swol_1822,
Swol_1823,
Swol_1824,
Swol_1825,
Swol_1826		 View Structure
16 2092940-2093060 (-)MOCO2091599-2092691 (-)Swol_1831

NADH dehydrogenase I chain G		Swol_1831Operon

DOOR ID: 219481		Swol_1830,
Swol_1831		 View Structure
17 2126080-2126197 (-)MOCO2125851-2126043 (-)Swol_1861

Swol_1861Single gene

DOOR ID: 1868284		Swol_1861 View Structure
18 2196867-2196986 (+)MOCO2197846-2199010 (+)Swol_1925

Ferredoxin hydrogenase 		Swol_1925Operon

DOOR ID: 219495		Swol_1925,
Swol_1926,
Swol_1927		 View Structure
19 2197046-2197168 (+)MOCO2197846-2199010 (+)Swol_1925

Ferredoxin hydrogenase 		Swol_1925Operon

DOOR ID: 219495		Swol_1925,
Swol_1926,
Swol_1927		 View Structure
20 2249385-2249503 (-)MOCO2247154-2248432 (-)Swol_1968

Swol_1968Single gene

DOOR ID: 1868348		Swol_1968 View Structure
21 2417608-2417838 (-)glmS2416380-2417484 (-)Swol_2099

Glutamine--fructose-6-phosphate aminotransferase [isomerizing]		Swol_2099Single gene

DOOR ID: 1868420		Swol_2099 View Structure
22 2528059-2528175 (-)MOCO2524325-2527637 (-)Swol_2188

Swol_2188Single gene

DOOR ID: 1868473		Swol_2188 View Structure