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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1520293-1520384
(-)
TPP
1518336-1520229 (-)
Mlg_1316
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Mlg_1316
Operon
DOOR ID:
217000
Mlg_1315,
Mlg_1316
View Structure
2
2382123-2382270
(+)
cobalamin
2382427-2385214 (+)
Mlg_2102
Vitamin B12-dependent ribonucleotide reductase
Mlg_2102
Single gene
DOOR ID:
1863631
Mlg_2102
View Structure
3
2565212-2565295
(+)
SAH
2565309-2566722 (+)
Mlg_2263
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
Mlg_2263
Operon
DOOR ID:
217191
Mlg_2262,
Mlg_2263
View Structure
4
2769530-2769577
(+)
mini-ykkC
2769592-2769907 (+)
HNE_2609
HNE_2609
Single gene
DOOR ID:
1870188
HNE_2609
View Structure
5
3201432-3201691
(-)
cobalamin
3199399-3201259 (-)
Mlg_2815
TonB-dependent receptor
Mlg_2815
Operon
DOOR ID:
217310
Mlg_2812,
Mlg_2813,
Mlg_2814,
Mlg_2815
View Structure
6
3205136-3205339
(+)
cobalamin
3205373-3206309 (+)
Mlg_2820
Periplasmic binding protein
Mlg_2820
Operon
DOOR ID:
217313
Mlg_2820,
Mlg_2821,
Mlg_2822,
Mlg_2823
View Structure
Genome:
Alkalilimnicola ehrlichii MLHE-1
(
NC_008340.1
);
Phylum:
Gammaproteobacteria
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