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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
446679-446736
(+)
ykkC-III
446751-447081 (+)
sugE
MXAN_0384
single gene
DOOR ID:
1820309
MXAN_0384
(sugE)
View Structure
2
4374415-4374485
(+)
ykkC-III
4374502-4374823 (+)
MXAN_3665
MXAN_3665
single gene
DOOR ID:
1820838
MXAN_3665
View Structure
3
5196312-5196419
(-)
TPP
5194387-5196262 (-)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
MXAN_4235
Single gene
DOOR ID:
1818339
MXAN_4235
(thiC)
View Structure
4
8035799-8035872
(+)
SAH
8035964-8037395 (+)
ahcY
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
MXAN_6516
Single gene
DOOR ID:
1818922
MXAN_6516
(ahcY)
View Structure
5
8100515-8100727
(-)
cobalamin
8098273-8099038 (-)
MXAN_6573
Putative lipoprotein
MXAN_6573
Operon
DOOR ID:
199082
MXAN_6572,
MXAN_6573,
MXAN_6574
View Structure
6
8106399-8106646
(-)
cobalamin
8104330-8106340 (-)
MXAN_6579
Putative TonB-dependent receptor
MXAN_6579
Operon
DOOR ID:
199083
MXAN_6575,
MXAN_6576,
MXAN_6577,
MXAN_6579
View Structure
Genome:
Myxococcus xanthus DK 1622
(
NC_008095.1
);
Phylum:
delta/epsilon subdivisions
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