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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
124653-124740
(-)
TPP
123267-124623 (-)
Ldb0151
ABC transporter; ATP-binding protein
Ldb0151
Operon
DOOR ID:
195845
Ldb0150,
Ldb0151
View Structure
2
141321-141496
(-)
lysine
139617-141201 (-)
Ldb0169
Amino acid ABC transporter; substrate binding / permease protein
Ldb0169
Operon
DOOR ID:
195849
Ldb0168,
Ldb0169
View Structure
3
251468-251565
(-)
purine
250830-251400 (-)
xpt
Xanthine phosphoribosyltransferase (XPRTase) (2)
Ldb0296
Operon
DOOR ID:
195865
Ldb0295
(pbuX)
,
Ldb0296
(xpt)
View Structure
4
286991-287154
(+)
ykoK
287243-289934 (+)
Ldb0341
Cation transporting P-type ATPase (Probable Mg2+ transporter)
Ldb0341
Single gene
DOOR ID:
1814482
Ldb0341
View Structure
5
431100-431196
(+)
TPP
431240-431810 (+)
Ldb0513
Conserved hypothetical membrane protein
Ldb0513
Single gene
DOOR ID:
1814521
Ldb0513
View Structure
6
735981-736096
(+)
FMN
736177-736882 (+)
Ldb0848
Riboflavin transporter
Ldb0848
Single gene
DOOR ID:
1814611
Ldb0848
View Structure
7
1355676-1355763
(-)
SMK_box
1352970-1354404 (-)
Ldb1574
Permease
Ldb1574
Operon
DOOR ID:
196055
Ldb1574,
Ldb1575
(metK)
View Structure
Genome:
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
(
NC_008054.1
);
Phylum:
Firmicutes
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