Genome: Pseudomonas entomophila L48 (NC_008027.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 620925-621066 (-)FMN620193-620844 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
PSEEN0609Single gene

DOOR ID: 1809602
PSEEN0609 (ribB) View Structure
2 937494-937612 (-)yybP-ykoY936817-937405 (-)PSEEN0905

PSEEN0905Single gene

DOOR ID: 1809709
PSEEN0905 View Structure
3 1440491-1440711 (+)cobalamin1440821-1441433 (+)PSEEN1378

Cob(I)yrinic acid a;c-diamide adenosyltransferase (7) (Cob(I)alamin adenosyltransferase) (Corrinoid adenosyltransferase)
PSEEN1378Operon

DOOR ID: 1174182
PSEEN1378,
PSEEN1379,
PSEEN1380,
PSEEN1381 (cobD),
PSEEN1382,
PSEEN1383,
PSEEN1384 (cobU),
PSEEN1385 (cobT),
PSEEN1386,
PSEEN1387 (cobS)
View Structure
4 1485746-1485807 (-)SAH1479243-1483239 (+)narB

Assimilatory nitrate reductase
PSEEN1417Single gene

DOOR ID: 1809894
PSEEN1417 (narB) View Structure
5 1636360-1636432 (+)SAH1637133-1637355 (+)PSEEN1568

PSEEN1568Single gene

DOOR ID: 1809973
PSEEN1568 View Structure
6 2096492-2096697 (-)cobalamin2094256-2096383 (-)PSEEN2012

Putative outer membrane ferric siderophore receptor
PSEEN2012Single gene

DOOR ID: 1810164
PSEEN2012 View Structure
7 2523859-2524084 (-)cobalamin2523566-2523752 (-)PSEEN2431

PSEEN2431Operon

DOOR ID: 1174366
PSEEN2426,
PSEEN2427 (cobM),
PSEEN2428,
PSEEN2429,
PSEEN2431
View Structure
8 2524145-2524344 (+)cobalamin2524444-2525512 (+)cobW

Cobalamin biosynthesis protein CobW
PSEEN2432Operon

DOOR ID: 1174367
PSEEN2432 (cobW),
PSEEN2433 (cobN),
PSEEN2434
View Structure
9 2693844-2694049 (+)cobalamin2694141-2694879 (+)PSEEN2578

PSEEN2578Single gene

DOOR ID: 1810402
PSEEN2578 View Structure
10 3280185-3280391 (+)cobalamin3280499-3281276 (+)PSEEN3066

Putative Fe uptake ABC transporter; ATP-binding protein
PSEEN3066Operon

DOOR ID: 1174477
PSEEN3066,
PSEEN3067,
PSEEN3068
View Structure
11 3719836-3719897 (-)fluoride3719385-3719763 (-)crcB

Putative fluoride ion transporter CrcB
PSEEN3444Single gene

DOOR ID: 1810764
PSEEN3444 (crcB) View Structure
12 3779240-3779286 (-)mini-ykkC3778384-3778741 (+)YPN_3314

YPN_3314Operon

DOOR ID: 201894
YPN_3311,
YPN_3312,
YPN_3313,
YPN_3314
View Structure
13 3821246-3821303 (-)SAH3816572-3816977 (-)PSEEN3543

Putative RNA polymerase-binding protein DksA
PSEEN3543Single gene

DOOR ID: 1810798
PSEEN3543 View Structure
14 5282420-5282526 (-)TPP5280380-5282261 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
PSEEN4977Single gene

DOOR ID: 1811319
PSEEN4977 (thiC) View Structure
15 5348242-5348337 (+)SAH5348358-5349768 (+)sahH

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
PSEEN5037Single gene

DOOR ID: 1811346
PSEEN5037 (sahH) View Structure