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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1078902-1079036
(-)
TPP
1076921-1078823 (-)
Csal_0959
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Csal_0959
Single gene
DOOR ID:
1796314
Csal_0959
View Structure
2
1704632-1704863
(-)
cobalamin
1702669-1704511 (-)
Csal_1502
TonB-dependent receptor
Csal_1502
Single gene
DOOR ID:
1796549
Csal_1502
View Structure
3
2189682-2189788
(+)
TPP
2189819-2190575 (+)
Csal_1932
ABC transporter related protein
Csal_1932
Operon
DOOR ID:
188037
Csal_1932,
Csal_1933
View Structure
4
2341823-2342007
(-)
yybP-ykoY
2340179-2341226 (+)
Csal_2071
DNA polymerase IV (Pol IV)
Csal_2071
Operon
DOOR ID:
188068
Csal_2070,
Csal_2071
View Structure
5
2902118-2902253
(+)
fluoride
2902343-2902742 (+)
Csal_2589
Putative fluoride ion transporter CrcB
Csal_2589
Operon
DOOR ID:
188181
Csal_2589,
Csal_2590
View Structure
Genome:
Chromohalobacter salexigens DSM 3043
(
NC_007963.1
);
Phylum:
Gammaproteobacteria
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