Genome: Shewanella denitrificans OS217 (NC_007954.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 114598-114731 (+)MOCO115799-116279 (+)moaC

Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)
Sden_0102Operon

DOOR ID: 185630
Sden_0101 (moaA),
Sden_0102 (moaC),
Sden_0103,
Sden_0104,
Sden_0105,
Sden_0106,
Sden_0107
View Structure
2 784742-784874 (-)yybP-ykoY784104-784659 (-)Sden_0682

Sden_0682Single gene

DOOR ID: 1791122
Sden_0682 View Structure
3 842778-842933 (+)cobalamin843046-845017 (+)Sden_0729

TonB-dependent receptor; plug
Sden_0729Single gene

DOOR ID: 1791149
Sden_0729 View Structure
4 2091848-2091948 (+)TPP2092232-2094293 (+)Sden_1770

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Sden_1770Operon

DOOR ID: 185939
Sden_1770,
Sden_1771,
Sden_1772,
Sden_1773,
Sden_1774 (thiG),
Sden_1775 (thiH)
View Structure
5 2534228-2534317 (+)c-di-GMP-I2534422-2537032 (+)Sden_2136

Chitinase. Glycosyl Hydrolase family 18
Sden_2136single gene

DOOR ID: 1791854
Sden_2136 View Structure
6 2747485-2747594 (-)TPP2745196-2747431 (-)Sden_2321

TonB-dependent receptor
Sden_2321Operon

DOOR ID: 186021
Sden_2318,
Sden_2319,
Sden_2320,
Sden_2321
View Structure
7 3036119-3036316 (-)lysine3034480-3036055 (-)Sden_2537

Na+/H+ antiporter NhaC
Sden_2537Single gene

DOOR ID: 1792076
Sden_2537 View Structure
8 3570573-3570742 (-)lysine3569044-3570394 (-)Sden_2982

Aspartokinase
Sden_2982Single gene

DOOR ID: 1792307
Sden_2982 View Structure