Genome: Escherichia coli UTI89 (NC_007946.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 79177-79276 (-)TPP78162-79146 (-)tbpA

Thiamine-binding periplasmic protein
UTI89_C0076Operon

DOOR ID: 181248
UTI89_C0074 (thiQ),
UTI89_C0075 (thiP),
UTI89_C0076 (tbpA)
View Structure
2 779855-779999 (+)MOCO780997-781510 (+)moaB

Molybdenum cofactor biosynthesis protein B
UTI89_C0781Operon

DOOR ID: 181386
UTI89_C0780 (moaA),
UTI89_C0781 (moaB)
View Structure
3 1932145-1932246 (+)yybP-ykoY1932322-1932943 (+)UTI89_C2019

Probable manganese efflux pump MntP
UTI89_C2019Single gene

DOOR ID: 1783072
UTI89_C2019 View Structure
4 2326094-2326190 (-)TPP2325270-2326059 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
UTI89_C2378Operon

DOOR ID: 181683
UTI89_C2375 (yegW),
UTI89_C2376 (yegX),
UTI89_C2377 (thiD),
UTI89_C2378 (thiM)
View Structure
5 2440543-2440591 (+)mini-ykkC2440615-2441458 (+)RPD_2186

RPD_2186Operon

DOOR ID: 187120
RPD_2183,
RPD_2184,
RPD_2185,
RPD_2186,
RPD_2187,
RPD_2188
View Structure
6 3419312-3419460 (-)FMN3418554-3419208 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
UTI89_C3483Single gene

DOOR ID: 1783502
UTI89_C3483 (ribB) View Structure
7 3710042-3710142 (+)TPP3710210-3712118 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
UTI89_C3825Operon

DOOR ID: 181974
UTI89_C3825 (thiC),
UTI89_C3826 (thiE),
UTI89_C3827 (thiF),
UTI89_C3828,
UTI89_C3829 (thiG),
UTI89_C3830 (thiH)
View Structure
8 4453092-4453282 (+)cobalamin4453301-4455191 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
UTI89_C4561Operon

DOOR ID: 182132
UTI89_C4561 (btuB),
UTI89_C4562 (murI)
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9 4485871-4486067 (-)lysine4484429-4485779 (-)lysC

Aspartokinase
UTI89_C4592Single gene

DOOR ID: 1783816
UTI89_C4592 (lysC) View Structure
10 4747262-4747377 (+)Mg sensor4747470-4750167 (+)mgtA

MgtA Mg2+-importing ATPase; P-type 1
UTI89_C4847Single gene

DOOR ID: 1783896
UTI89_C4847 (mgtA) View Structure