Genome: Rhodospirillum rubrum ATCC 11170 (NC_007643.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 293075-293134 (+)fluoride293244-293634 (+)Rru_A0236

Putative fluoride ion transporter CrcB		Rru_A0236Operon

DOOR ID: 161748		Rru_A0236,
Rru_A0237		 View Structure
2 347596-347706 (-)yybP-ykoY346929-347511 (-)Rru_A0282

Putative manganese efflux pump MntP		Rru_A0282Single gene

DOOR ID: 1735395		Rru_A0282 View Structure
3 537266-537472 (+)cobalamin537510-538188 (+)Rru_A0458

Rru_A0458Single gene

DOOR ID: 1735482		Rru_A0458 View Structure
4 572902-573134 (+)cobalamin573217-575266 (+)Rru_A0488

TonB-dependent receptor		Rru_A0488Operon

DOOR ID: 161794		Rru_A0488,
Rru_A0489,
Rru_A0490		 View Structure
5 1340533-1340749 (+)cobalamin1340975-1342007 (+)Rru_A1136

Periplasmic binding protein		Rru_A1136Operon

DOOR ID: 161933		Rru_A1136,
Rru_A1137,
Rru_A1138,
Rru_A1139		 View Structure
6 1501675-1501900 (-)cobalamin1499516-1501538 (-)Rru_A1276

ATP-cone 		Rru_A1276Operon

DOOR ID: 161960		Rru_A1274,
Rru_A1275,
Rru_A1276		 View Structure
7 1707586-1707782 (+)cobalamin1707875-1709765 (+)Rru_A1444

Ribonucleoside-diphosphate reductase 		Rru_A1444Operon

DOOR ID: 161998		Rru_A1444,
Rru_A1445 (nrdF)		 View Structure
8 2009119-2009340 (+)cobalamin2009448-2011794 (+)Rru_A1718

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		Rru_A1718Operon

DOOR ID: 162058		Rru_A1718,
Rru_A1719		 View Structure
9 2319857-2319989 (+)TPP2320062-2321928 (+)Rru_A2008

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Rru_A2008Operon

DOOR ID: 162119		Rru_A2008,
Rru_A2009		 View Structure
10 2551172-2551329 (+)FMN2551476-2552121 (+)Rru_A2197

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		Rru_A2197Single gene

DOOR ID: 1736154		Rru_A2197 View Structure
11 3492817-3492924 (+)ykkC-yxkD3492943-3493843 (+)Rru_A3034

Rru_A3034Single gene

DOOR ID: 1736500		Rru_A3034 View Structure
12 3515291-3515396 (-)glycine3514106-3515234 (-)gcvT

Glycine cleavage system T protein (0)		Rru_A3051Single gene

DOOR ID: 1736511		Rru_A3051 (gcvT) View Structure
13 3515401-3515512 (-)glycine3514106-3515234 (-)gcvT

Glycine cleavage system T protein (0)		Rru_A3051Single gene

DOOR ID: 1736511		Rru_A3051 (gcvT) View Structure
14 3707042-3707118 (-)sam-alpha3705743-3706985 (-)Rru_A3214

O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase) 		Rru_A3214Single gene

DOOR ID: 1736568		Rru_A3214 View Structure
15 4381491-4381537 (+)mini-ykkC4381554-4381872 (+)sugE

Y75_p4037Single gene

DOOR ID: 1764081		Y75_p4037 (sugE) View Structure