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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
253983-254095
(-)
TPP
249323-251747 (-)
amb0220
Methyl-accepting chemotaxis protein
amb0220
Single gene
DOOR ID:
1733585
amb0220
View Structure
2
306940-307165
(+)
cobalamin
307254-307905 (+)
amb0275
Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)
amb0275
Operon
DOOR ID:
160593
amb0275,
amb0276,
amb0277,
amb0278,
amb0279
View Structure
3
822411-822508
(+)
glycine
822699-823815 (+)
gcvT
Glycine cleavage system T protein
amb0766
Operon
DOOR ID:
160699
amb0766
(gcvT)
,
amb0767,
amb0768,
amb0769,
amb0770
View Structure
4
822512-822620
(+)
glycine
822699-823815 (+)
gcvT
Glycine cleavage system T protein
amb0766
Operon
DOOR ID:
160699
amb0766
(gcvT)
,
amb0767,
amb0768,
amb0769,
amb0770
View Structure
5
1166409-1166455
(+)
mini-ykkC
1166478-1166799 (+)
BTH_I1027
BTH_I1027
Single gene
DOOR ID:
1741883
BTH_I1027
View Structure
6
1933414-1933602
(+)
cobalamin
1933802-1935182 (+)
amb1795
Arylsulfatase regulator
amb1795
Operon
DOOR ID:
160910
amb1794,
amb1795
View Structure
7
2648625-2648800
(-)
yybP-ykoY
2645852-2647934 (+)
amb2467
RecG-like helicase
amb2467
Single gene
DOOR ID:
1734339
amb2467
View Structure
8
3778384-3778636
(-)
cobalamin
3776934-3778356 (-)
amb3444
Porin
amb3444
Single gene
DOOR ID:
1734626
amb3444
View Structure
9
4636197-4636275
(-)
sam-alpha
4634934-4636176 (-)
amb4225
O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
amb4225
Single gene
DOOR ID:
1734900
amb4225
View Structure
Genome:
Magnetospirillum magneticum AMB-1
(
NC_007626.1
);
Phylum:
Alphaproteobacteria
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