Genome: Shigella dysenteriae Sd197 (NC_007606.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 95980-96079 (-)TPP94965-95949 (-)tbpA

Thiamin-binding periplasmic protein

DOOR ID: 157114
SDY_0093 (thiQ),
SDY_0094 (thiP),
SDY_0095 (tbpA)
View Structure
2 768693-768837 (-)MOCO767181-767694 (-)moaB

Molybdenum cofactor biosynthesis protein B

DOOR ID: 157270
SDY_0821 (moaE),
SDY_0822 (moaD),
SDY_0823 (moaC),
SDY_0824 (moaB),
SDY_0825 (moaA)
View Structure
3 1410478-1410525 (+)mini-ykkC1411003-1411756 (-)amb1291

amb1291Single gene

DOOR ID: 1733964
amb1291 View Structure
4 1789337-1789438 (+)yybP-ykoY1789514-1790135 (+)SDY_1967

Probable manganese efflux pump MntP
SDY_1967Single gene

DOOR ID: 1727046
SDY_1967 View Structure
5 2073271-2073367 (-)TPP2072447-2073236 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)

DOOR ID: 157520
SDY_2274 (yegW),
SDY_2275 (yegX),
SDY_2277 (thiD),
SDY_2278 (thiM)
View Structure
6 2989885-2990033 (-)FMN2989127-2989781 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
SDY_3226Single gene

DOOR ID: 1727503
SDY_3226 (ribB) View Structure
7 3461625-3461725 (+)TPP3461805-3463701 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 157816
SDY_3732 (thiC),
SDY_3733 (thiE),
SDY_3734 (thiF),
SDY_3735 (thiS),
SDY_3736 (thiG),
SDY_3737 (thiH)
View Structure
8 3494832-3495022 (-)cobalamin3492922-3494767 (-)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 157821
SDY_3761 (murI),
SDY_3762 (btuB)
View Structure
9 3959792-3959988 (+)lysine3960079-3961429 (+)lysC

SDY_4227Single gene

DOOR ID: 1727825
SDY_4227 (lysC) View Structure
10 3992977-3993092 (+)Mg sensor3993185-3995882 (+)mgtA

Mg2+ transport ATPase; P-type 1
SDY_4261Single gene

DOOR ID: 1727841
SDY_4261 (mgtA) View Structure