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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
181485-181608
(-)
TPP
179360-181253 (-)
Tcr_0148
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Tcr_0148
Operon
DOOR ID:
153876
Tcr_0143,
Tcr_0144,
Tcr_0145
(thiG)
,
Tcr_0146,
Tcr_0147,
Tcr_0148
View Structure
2
325943-326021
(+)
c-di-GMP-I
326113-326713 (+)
Tcr_0278
Uncharacterized protein
Tcr_0278
single gene
DOOR ID:
1720035
Tcr_0278
View Structure
3
326120-326199
(+)
c-di-GMP-I
326772-327531 (-)
Tcr_0279
tRNA pseudouridine synthase C
Tcr_0279
single gene
DOOR ID:
1720036
Tcr_0279
View Structure
4
1043179-1043405
(-)
cobalamin
1041168-1043013 (-)
Tcr_0963
TonB-dependent receptor
Tcr_0963
Operon
DOOR ID:
154043
Tcr_0962,
Tcr_0963
View Structure
5
1048651-1048725
(+)
c-di-GMP-I
1049219-1050794 (+)
Tcr_0970
Peptide chain release factor 3 (RF-3)
Tcr_0970
single gene
DOOR ID:
1720234
Tcr_0970
View Structure
6
1051066-1051149
(+)
c-di-GMP-I
1051399-1052761 (-)
Tcr_0971
Magnesium transporter MgtE
Tcr_0971
single gene
DOOR ID:
1720235
Tcr_0971
View Structure
7
2279240-2279341
(+)
TPP
2279402-2281496 (+)
Tcr_2064
TonB-dependent receptor
Tcr_2064
Single gene
DOOR ID:
1720597
Tcr_2064
View Structure
Genome:
Thiomicrospira crunogena XCL-2
(
NC_007520.2
);
Phylum:
Gammaproteobacteria
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